RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
COL1A1-209ENST00000495677 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
COL1A1-209ENST00000495677 VPREB1P12018 145 aa7.48□□□□□ -1.21
COL1A1-209ENST00000495677 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
COL1A1-209ENST00000495677 G0S2P27469 103 aa7.48□□□□□ -1.21
COL1A1-209ENST00000495677 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
COL1A1-209ENST00000495677 COX19Q49B96 90 aa7.47□□□□□ -1.21
COL1A1-209ENST00000495677 Q8NBF4 154 aa7.47□□□□□ -1.21
COL1A1-209ENST00000495677 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
COL1A1-209ENST00000495677 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
COL1A1-209ENST00000495677 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
COL1A1-209ENST00000495677 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
COL1A1-209ENST00000495677 ZNF706Q9Y5V0 76 aaPredicted RBP7.46□□□□□ -1.22
COL1A1-209ENST00000495677 FAM19A2Q8N3H0 131 aa7.45□□□□□ -1.22
COL1A1-209ENST00000495677 HIGD2AQ9BW72 106 aa7.45□□□□□ -1.22
COL1A1-209ENST00000495677 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
COL1A1-209ENST00000495677 FA2HQ7L5A8 372 aa7.44□□□□□ -1.22
COL1A1-209ENST00000495677 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
COL1A1-209ENST00000495677 SMCO4Q9NRQ5 59 aa7.44□□□□□ -1.22
COL1A1-209ENST00000495677 ATP5LO75964 103 aa7.43□□□□□ -1.22
COL1A1-209ENST00000495677 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
COL1A1-209ENST00000495677 COX17Q14061 63 aa7.43□□□□□ -1.22
COL1A1-209ENST00000495677 ERASQ7Z444 233 aa7.43□□□□□ -1.22
COL1A1-209ENST00000495677 Q8N377 158 aa7.43□□□□□ -1.22
COL1A1-209ENST00000495677 SND1-IT1Q9HBX3 110 aa7.43□□□□□ -1.22
COL1A1-209ENST00000495677 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
COL1A1-209ENST00000495677 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
COL1A1-209ENST00000495677 PFN2P35080 140 aa7.4□□□□□ -1.22
COL1A1-209ENST00000495677 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
COL1A1-209ENST00000495677 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 SLC25A20O43772 301 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 Q8NDZ9 215 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 C18orf32Q8TCD1 76 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
COL1A1-209ENST00000495677 PMCHL1Q16048 86 aa7.38□□□□□ -1.23
COL1A1-209ENST00000495677 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
COL1A1-209ENST00000495677 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
COL1A1-209ENST00000495677 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
COL1A1-209ENST00000495677 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
COL1A1-209ENST00000495677 H3BRM9 83 aa7.36□□□□□ -1.23
COL1A1-209ENST00000495677 SPRR1AP35321 89 aa7.36□□□□□ -1.23
COL1A1-209ENST00000495677 SMCR5Q8TEV8 140 aa7.36□□□□□ -1.23
COL1A1-209ENST00000495677 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
COL1A1-209ENST00000495677 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
COL1A1-209ENST00000495677 TRGC2P03986 189 aa7.34□□□□□ -1.23
COL1A1-209ENST00000495677 NDUFA6P56556 154 aa7.34□□□□□ -1.23
COL1A1-209ENST00000495677 PMVKQ15126 192 aa7.34□□□□□ -1.23
COL1A1-209ENST00000495677 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
COL1A1-209ENST00000495677 LINC01546A6NGU7 62 aa7.33□□□□□ -1.24
COL1A1-209ENST00000495677 PRYO14603 147 aa7.33□□□□□ -1.24
COL1A1-209ENST00000495677 HBDP02042 147 aa7.33□□□□□ -1.24
COL1A1-209ENST00000495677 LINC00614P0C842 121 aa7.33□□□□□ -1.24
COL1A1-209ENST00000495677 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
COL1A1-209ENST00000495677 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
COL1A1-209ENST00000495677 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
COL1A1-209ENST00000495677 BAGE3Q86Y29 109 aa7.32□□□□□ -1.24
COL1A1-209ENST00000495677 KCNQ1DNQ9H478 68 aa7.32□□□□□ -1.24
COL1A1-209ENST00000495677 A0A096LNJ9 63 aa7.31□□□□□ -1.24
COL1A1-209ENST00000495677 MOBPQ13875 183 aa7.31□□□□□ -1.24
COL1A1-209ENST00000495677 COLCA2A8K830 154 aa7.3□□□□□ -1.24
COL1A1-209ENST00000495677 IGLC3P0DOY3 106 aa7.3□□□□□ -1.24
COL1A1-209ENST00000495677 GAGE2AQ6NT46 116 aa7.29□□□□□ -1.24
COL1A1-209ENST00000495677 ZNF625Q96I27 306 aaPredicted RBP7.29□□□□□ -1.24
COL1A1-209ENST00000495677 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
COL1A1-209ENST00000495677 H0Y8G0 127 aa7.28□□□□□ -1.24
COL1A1-209ENST00000495677 HSBP1O75506 76 aa7.28□□□□□ -1.24
COL1A1-209ENST00000495677 ZNF22P17026 224 aaPredicted RBP7.28□□□□□ -1.24
COL1A1-209ENST00000495677 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
COL1A1-209ENST00000495677 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
COL1A1-209ENST00000495677 ETDCA0A1B0GVM5 59 aa7.27□□□□□ -1.25
COL1A1-209ENST00000495677 M0R2T5 61 aa7.27□□□□□ -1.25
COL1A1-209ENST00000495677 ATP6V1G1O75348 118 aa7.27□□□□□ -1.25
COL1A1-209ENST00000495677 SERF1AO75920 110 aa7.27□□□□□ -1.25
COL1A1-209ENST00000495677 LINC00158P58513 81 aa7.25□□□□□ -1.25
COL1A1-209ENST00000495677 B5MCH6 92 aa7.24□□□□□ -1.25
COL1A1-209ENST00000495677 ERC2-IT1O76042 136 aa7.24□□□□□ -1.25
COL1A1-209ENST00000495677 LINC00310P59036 64 aa7.24□□□□□ -1.25
COL1A1-209ENST00000495677 IFI27L1Q96BM0 104 aa7.24□□□□□ -1.25
COL1A1-209ENST00000495677 FABP4P15090 132 aa7.23□□□□□ -1.25
COL1A1-209ENST00000495677 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
COL1A1-209ENST00000495677 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
COL1A1-209ENST00000495677 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 C11orf86A6NJI1 115 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BKO60814 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 LEPROTL1O95214 131 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BJP06899 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BOP23527 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BBP33778 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BDP58876 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BCP62807 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 S100A12P80511 92 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST2H2BEQ16778 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.21□□□□□ -1.26
COL1A1-209ENST00000495677 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BHQ93079 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BNQ99877 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 HIST1H2BMQ99879 126 aa7.21□□□□□ -1.26
COL1A1-209ENST00000495677 S100A1P23297 94 aa7.2□□□□□ -1.26
COL1A1-209ENST00000495677 Q9BRP9 147 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms