RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 RPL18AQ02543 176 aaKnown RBP9.42□□□□□ -0.9
PTPRE-211ENST00000495530 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRE-211ENST00000495530 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
PTPRE-211ENST00000495530 PRO1933Q9H354 126 aa9.42□□□□□ -0.9
PTPRE-211ENST00000495530 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
PTPRE-211ENST00000495530 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
PTPRE-211ENST00000495530 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-211ENST00000495530 GAGE2BQ13066 116 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 Q6ZRP5 223 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 LITAFQ99732 161 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
PTPRE-211ENST00000495530 IFITM1P13164 125 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 PTTG1IPP53801 180 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 HIST1H4GQ99525 98 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
PTPRE-211ENST00000495530 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
PTPRE-211ENST00000495530 FUSP35637 526 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRE-211ENST00000495530 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
PTPRE-211ENST00000495530 DPH3Q96FX2 82 aa9.38□□□□□ -0.91
PTPRE-211ENST00000495530 LOC107984156A0A0G2JMH3 177 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
PTPRE-211ENST00000495530 TAL2Q16559 108 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 C2orf91Q6ZV80 131 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 ARL17AQ8IVW1 177 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 DAND5Q8N907 189 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
PTPRE-211ENST00000495530 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
PTPRE-211ENST00000495530 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
PTPRE-211ENST00000495530 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
PTPRE-211ENST00000495530 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
PTPRE-211ENST00000495530 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
PTPRE-211ENST00000495530 A0A096LNI7 61 aa9.35□□□□□ -0.91
PTPRE-211ENST00000495530 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
PTPRE-211ENST00000495530 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
PTPRE-211ENST00000495530 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
PTPRE-211ENST00000495530 NPC2P61916 151 aa9.33□□□□□ -0.92
PTPRE-211ENST00000495530 C9orf129Q5T035 196 aaKnown RBP9.33□□□□□ -0.92
PTPRE-211ENST00000495530 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
PTPRE-211ENST00000495530 HSD52Q0P140 79 aa9.32□□□□□ -0.92
PTPRE-211ENST00000495530 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-211ENST00000495530 NDUFC2O95298 119 aa9.31□□□□□ -0.92
PTPRE-211ENST00000495530 DDTP30046 118 aa9.31□□□□□ -0.92
PTPRE-211ENST00000495530 KRTAP10-1P60331 282 aa9.31□□□□□ -0.92
PTPRE-211ENST00000495530 CEND1Q8N111 149 aa9.31□□□□□ -0.92
PTPRE-211ENST00000495530 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
PTPRE-211ENST00000495530 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
PTPRE-211ENST00000495530 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
PTPRE-211ENST00000495530 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
PTPRE-211ENST00000495530 A6NJY4 79 aa9.29□□□□□ -0.92
PTPRE-211ENST00000495530 CTAG1AP78358 180 aa9.29□□□□□ -0.92
PTPRE-211ENST00000495530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-211ENST00000495530 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
PTPRE-211ENST00000495530 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
PTPRE-211ENST00000495530 M0R143 59 aa9.27□□□□□ -0.93
PTPRE-211ENST00000495530 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-211ENST00000495530 Q6ZSA8 131 aa9.27□□□□□ -0.93
PTPRE-211ENST00000495530 A0A087WYN8 130 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 TRBV10-2A0A0K0K1G8 114 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 A0A1W2PNN7 141 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 A4D1N5 150 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 PANO1I0J062 215 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 VPREB1P12018 145 aa9.26□□□□□ -0.93
PTPRE-211ENST00000495530 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-211ENST00000495530 FAM168BA1KXE4 195 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 M0R378 163 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-211ENST00000495530 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
PTPRE-211ENST00000495530 FAT1Q14517 4588 aa9.23□□□□□ -0.93
PTPRE-211ENST00000495530 TRAV13-2A0A0B4J235 113 aa9.23□□□□□ -0.93
PTPRE-211ENST00000495530 M0QXV9 152 aa9.23□□□□□ -0.93
PTPRE-211ENST00000495530 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
PTPRE-211ENST00000495530 MRPL55Q7Z7F7 128 aaKnown RBP9.23□□□□□ -0.93
PTPRE-211ENST00000495530 PCP4L1A6NKN8 68 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 NCR3O14931 201 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 HINT1P49773 126 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-211ENST00000495530 FXYD2P54710 66 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 KRTAP7-1Q8IUC3 87 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
PTPRE-211ENST00000495530 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.93
PTPRE-211ENST00000495530 Q8NDZ9 215 aa9.21□□□□□ -0.94
PTPRE-211ENST00000495530 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
PTPRE-211ENST00000495530 RAB37Q96AX2 223 aa9.21□□□□□ -0.94
PTPRE-211ENST00000495530 TMEM126AQ9H061 195 aa9.21□□□□□ -0.94
PTPRE-211ENST00000495530 IGKV2-28A0A075B6P5 120 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 A6NDN8 102 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 IGKV2D-28P01615 120 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 CFC1P0CG37 223 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms