RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 S100A6P06703 90 aa8.38□□□□□ -1.07
FDPS-219ENST00000495308 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
FDPS-219ENST00000495308 HERV-K104P63124 156 aa8.38□□□□□ -1.07
FDPS-219ENST00000495308 C1orf137Q5JT78 98 aa8.38□□□□□ -1.07
FDPS-219ENST00000495308 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
FDPS-219ENST00000495308 E9PLD3 99 aa8.37□□□□□ -1.07
FDPS-219ENST00000495308 S100A2P29034 98 aa8.37□□□□□ -1.07
FDPS-219ENST00000495308 HIST1H2BLQ99880 126 aa8.37□□□□□ -1.07
FDPS-219ENST00000495308 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
FDPS-219ENST00000495308 Q8NDZ9 215 aa8.36□□□□□ -1.07
FDPS-219ENST00000495308 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
FDPS-219ENST00000495308 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 C20orf202A1L168 122 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 NMUP48645 174 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
FDPS-219ENST00000495308 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
FDPS-219ENST00000495308 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 NKAPP1Q8N9T2 125 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
FDPS-219ENST00000495308 TNXBP22105 4242 aa8.34□□□□□ -1.07
FDPS-219ENST00000495308 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
FDPS-219ENST00000495308 VPREB1P12018 145 aa8.34□□□□□ -1.07
FDPS-219ENST00000495308 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
FDPS-219ENST00000495308 IGKV2D-26A0A0A0MRZ7 120 aa8.33□□□□□ -1.08
FDPS-219ENST00000495308 DAND5Q8N907 189 aa8.33□□□□□ -1.08
FDPS-219ENST00000495308 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
FDPS-219ENST00000495308 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
FDPS-219ENST00000495308 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
FDPS-219ENST00000495308 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
FDPS-219ENST00000495308 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
FDPS-219ENST00000495308 RPL24P83731 157 aaKnown RBP8.31□□□□□ -1.08
FDPS-219ENST00000495308 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
FDPS-219ENST00000495308 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
FDPS-219ENST00000495308 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
FDPS-219ENST00000495308 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
FDPS-219ENST00000495308 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
FDPS-219ENST00000495308 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
FDPS-219ENST00000495308 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
FDPS-219ENST00000495308 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
FDPS-219ENST00000495308 J3QL48 77 aa8.29□□□□□ -1.08
FDPS-219ENST00000495308 NCR3O14931 201 aa8.28□□□□□ -1.08
FDPS-219ENST00000495308 OXTP01178 125 aa8.28□□□□□ -1.08
FDPS-219ENST00000495308 NPC2P61916 151 aa8.27□□□□□ -1.09
FDPS-219ENST00000495308 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
FDPS-219ENST00000495308 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
FDPS-219ENST00000495308 BCE1O60756 84 aa8.26□□□□□ -1.09
FDPS-219ENST00000495308 AKR1D1P51857 326 aa8.26□□□□□ -1.09
FDPS-219ENST00000495308 TMEM238C9JI98 176 aa8.25□□□□□ -1.09
FDPS-219ENST00000495308 M0R378 163 aa8.25□□□□□ -1.09
FDPS-219ENST00000495308 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
FDPS-219ENST00000495308 LITAFQ99732 161 aa8.25□□□□□ -1.09
FDPS-219ENST00000495308 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
FDPS-219ENST00000495308 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 H0Y9J4 135 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 PCP2Q8IVA1 136 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 DIRC1Q969H9 104 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
FDPS-219ENST00000495308 ZNF861PO60384 105 aa8.23□□□□□ -1.09
FDPS-219ENST00000495308 SCGB1D1O95968 90 aa8.23□□□□□ -1.09
FDPS-219ENST00000495308 TIMM17BO60830 172 aa8.22□□□□□ -1.09
FDPS-219ENST00000495308 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
FDPS-219ENST00000495308 UBE2AP49459 152 aa8.21□□□□□ -1.1
FDPS-219ENST00000495308 SCGB1D4Q6XE38 83 aa8.21□□□□□ -1.1
FDPS-219ENST00000495308 FAM19A1Q7Z5A9 133 aa8.21□□□□□ -1.1
FDPS-219ENST00000495308 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
FDPS-219ENST00000495308 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
FDPS-219ENST00000495308 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
FDPS-219ENST00000495308 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
FDPS-219ENST00000495308 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
FDPS-219ENST00000495308 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
FDPS-219ENST00000495308 TRBV10-3A0A0K0K1G6 114 aa8.19□□□□□ -1.1
FDPS-219ENST00000495308 NDUFC2O95298 119 aa8.19□□□□□ -1.1
FDPS-219ENST00000495308 PRLHP81277 87 aa8.19□□□□□ -1.1
FDPS-219ENST00000495308 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
FDPS-219ENST00000495308 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
FDPS-219ENST00000495308 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
FDPS-219ENST00000495308 PRYO14603 147 aa8.18□□□□□ -1.1
FDPS-219ENST00000495308 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
FDPS-219ENST00000495308 DDTP30046 118 aa8.17□□□□□ -1.1
FDPS-219ENST00000495308 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
FDPS-219ENST00000495308 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
FDPS-219ENST00000495308 S100A7L2Q5SY68 101 aa8.16□□□□□ -1.1
FDPS-219ENST00000495308 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
FDPS-219ENST00000495308 SPRR1AP35321 89 aa8.14□□□□□ -1.11
FDPS-219ENST00000495308 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
FDPS-219ENST00000495308 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
FDPS-219ENST00000495308 ETDCA0A1B0GVM5 59 aa8.13□□□□□ -1.11
FDPS-219ENST00000495308 IGLV6-57P01721 117 aa8.13□□□□□ -1.11
FDPS-219ENST00000495308 S100A12P80511 92 aa8.13□□□□□ -1.11
FDPS-219ENST00000495308 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
FDPS-219ENST00000495308 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
FDPS-219ENST00000495308 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
FDPS-219ENST00000495308 LINC00337Q8N6G1 96 aa8.12□□□□□ -1.11
FDPS-219ENST00000495308 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
FDPS-219ENST00000495308 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms