RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 DPH3Q96FX2 82 aa10.79□□□□□ -0.68
SNX17-209ENST00000494893 MYCBP2O75592 4640 aa10.79□□□□□ -0.68
SNX17-209ENST00000494893 TIMM17BO60830 172 aa10.78□□□□□ -0.68
SNX17-209ENST00000494893 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
SNX17-209ENST00000494893 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
SNX17-209ENST00000494893 LINC00587B1AMM8 73 aa10.77□□□□□ -0.69
SNX17-209ENST00000494893 PLA2G1BP04054 148 aaKnown RBP10.77□□□□□ -0.69
SNX17-209ENST00000494893 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
SNX17-209ENST00000494893 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.69
SNX17-209ENST00000494893 PKHD1L1Q86WI1 4243 aa10.77□□□□□ -0.69
SNX17-209ENST00000494893 DDTP30046 118 aa10.76□□□□□ -0.69
SNX17-209ENST00000494893 LITAFQ99732 161 aa10.76□□□□□ -0.69
SNX17-209ENST00000494893 ERG28Q9UKR5 140 aa10.76□□□□□ -0.69
SNX17-209ENST00000494893 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
SNX17-209ENST00000494893 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
SNX17-209ENST00000494893 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 SMIM13P0DJ93 91 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 RPL37AP61513 92 aaKnown RBP10.74□□□□□ -0.69
SNX17-209ENST00000494893 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
SNX17-209ENST00000494893 COX17Q14061 63 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
SNX17-209ENST00000494893 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 Q6ZRP5 223 aa10.74□□□□□ -0.69
SNX17-209ENST00000494893 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
SNX17-209ENST00000494893 LINC00158P58513 81 aa10.73□□□□□ -0.69
SNX17-209ENST00000494893 A0A0U1RRA0 63 aa10.72□□□□□ -0.69
SNX17-209ENST00000494893 PCP4L1A6NKN8 68 aa10.72□□□□□ -0.69
SNX17-209ENST00000494893 PFN2P35080 140 aa10.72□□□□□ -0.69
SNX17-209ENST00000494893 FLG2Q5D862 2391 aaPredicted RBP10.72□□□□□ -0.69
SNX17-209ENST00000494893 CTAG1AP78358 180 aa10.71□□□□□ -0.69
SNX17-209ENST00000494893 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNX17-209ENST00000494893 TAL2Q16559 108 aa10.71□□□□□ -0.69
SNX17-209ENST00000494893 Q6ZVH6 145 aa10.71□□□□□ -0.69
SNX17-209ENST00000494893 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
SNX17-209ENST00000494893 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
SNX17-209ENST00000494893 HSD52Q0P140 79 aa10.7□□□□□ -0.7
SNX17-209ENST00000494893 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
SNX17-209ENST00000494893 KRTAP7-1Q8IUC3 87 aa10.69□□□□□ -0.7
SNX17-209ENST00000494893 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
SNX17-209ENST00000494893 DAND5Q8N907 189 aa10.69□□□□□ -0.7
SNX17-209ENST00000494893 GAGE2EQ4V326 116 aa10.68□□□□□ -0.7
SNX17-209ENST00000494893 GAGE2DQ9UEU5 116 aa10.68□□□□□ -0.7
SNX17-209ENST00000494893 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
SNX17-209ENST00000494893 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
SNX17-209ENST00000494893 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
SNX17-209ENST00000494893 IFITM1P13164 125 aa10.67□□□□□ -0.7
SNX17-209ENST00000494893 FAT3Q8TDW7 4589 aa10.67□□□□□ -0.7
SNX17-209ENST00000494893 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
SNX17-209ENST00000494893 LINC00308Q8TCZ7 52 aa10.66□□□□□ -0.7
SNX17-209ENST00000494893 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
SNX17-209ENST00000494893 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.7
SNX17-209ENST00000494893 CEND1Q8N111 149 aa10.65□□□□□ -0.7
SNX17-209ENST00000494893 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.7
SNX17-209ENST00000494893 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
SNX17-209ENST00000494893 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
SNX17-209ENST00000494893 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
SNX17-209ENST00000494893 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
SNX17-209ENST00000494893 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
SNX17-209ENST00000494893 EIF4EBP3O60516 100 aaPredicted RBP10.63□□□□□ -0.71
SNX17-209ENST00000494893 NPC2P61916 151 aa10.63□□□□□ -0.71
SNX17-209ENST00000494893 PRR3P79522 188 aaKnown RBP10.63□□□□□ -0.71
SNX17-209ENST00000494893 ARL17AQ8IVW1 177 aa10.63□□□□□ -0.71
SNX17-209ENST00000494893 M0R143 59 aa10.62□□□□□ -0.71
SNX17-209ENST00000494893 BVES-AS1Q5T3Y7 98 aa10.62□□□□□ -0.71
SNX17-209ENST00000494893 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
SNX17-209ENST00000494893 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
SNX17-209ENST00000494893 FAM19A5Q7Z5A7 132 aaPredicted RBP10.61□□□□□ -0.71
SNX17-209ENST00000494893 KRTAP11-1Q8IUC1 163 aa10.61□□□□□ -0.71
SNX17-209ENST00000494893 HERC1Q15751 4861 aa10.6□□□□□ -0.71
SNX17-209ENST00000494893 FXYD2P54710 66 aa10.6□□□□□ -0.71
SNX17-209ENST00000494893 XAGE1AQ9HD64 81 aa10.6□□□□□ -0.71
SNX17-209ENST00000494893 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
SNX17-209ENST00000494893 A4D1N5 150 aa10.58□□□□□ -0.72
SNX17-209ENST00000494893 TMEM238LA0A1B0GVL6 79 aa10.57□□□□□ -0.72
SNX17-209ENST00000494893 A6NJY4 79 aa10.57□□□□□ -0.72
SNX17-209ENST00000494893 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
SNX17-209ENST00000494893 KRTAP29-1A8MX34 341 aaPredicted RBP10.56□□□□□ -0.72
SNX17-209ENST00000494893 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
SNX17-209ENST00000494893 M0QXV9 152 aa10.55□□□□□ -0.72
SNX17-209ENST00000494893 NDUFC2O95298 119 aa10.55□□□□□ -0.72
SNX17-209ENST00000494893 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
SNX17-209ENST00000494893 BATFQ16520 125 aa10.54□□□□□ -0.72
SNX17-209ENST00000494893 Q8NDZ9 215 aa10.53□□□□□ -0.72
SNX17-209ENST00000494893 PLA2G2DQ9UNK4 145 aa10.53□□□□□ -0.72
SNX17-209ENST00000494893 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
SNX17-209ENST00000494893 CFC1BP0CG36 223 aa10.52□□□□□ -0.73
SNX17-209ENST00000494893 CFC1P0CG37 223 aa10.52□□□□□ -0.73
SNX17-209ENST00000494893 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
SNX17-209ENST00000494893 C22orf24Q9Y442 160 aa10.52□□□□□ -0.73
SNX17-209ENST00000494893 IGKV2-28A0A075B6P5 120 aa10.51□□□□□ -0.73
SNX17-209ENST00000494893 A6NDN8 102 aa10.51□□□□□ -0.73
SNX17-209ENST00000494893 IGKV2D-28P01615 120 aa10.51□□□□□ -0.73
SNX17-209ENST00000494893 VPREB1P12018 145 aa10.51□□□□□ -0.73
SNX17-209ENST00000494893 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
SNX17-209ENST00000494893 OXTP01178 125 aa10.5□□□□□ -0.73
SNX17-209ENST00000494893 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
SNX17-209ENST00000494893 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
SNX17-209ENST00000494893 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms