RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
CSNK1E-212ENST00000494610 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
CSNK1E-212ENST00000494610 COX17Q14061 63 aa7.53□□□□□ -1.2
CSNK1E-212ENST00000494610 Q6ZVH6 145 aa7.53□□□□□ -1.2
CSNK1E-212ENST00000494610 CARD19Q96LW7 228 aa7.53□□□□□ -1.2
CSNK1E-212ENST00000494610 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
CSNK1E-212ENST00000494610 SYCNQ0VAF6 134 aa7.52□□□□□ -1.21
CSNK1E-212ENST00000494610 RNF151Q2KHN1 245 aa7.52□□□□□ -1.21
CSNK1E-212ENST00000494610 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 TAL2Q16559 108 aa7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 TTTY13Q9BZ97 58 aa7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
CSNK1E-212ENST00000494610 DDTP30046 118 aa7.5□□□□□ -1.21
CSNK1E-212ENST00000494610 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
CSNK1E-212ENST00000494610 IFITM1P13164 125 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 HSD52Q0P140 79 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 LPAP08519 4548 aa7.49□□□□□ -1.21
CSNK1E-212ENST00000494610 M0R143 59 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 LINC00158P58513 81 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 UNQ6190/PRO20217Q6UXQ8 127 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 Q6ZRU5 148 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 C2orf91Q6ZV80 131 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
CSNK1E-212ENST00000494610 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
CSNK1E-212ENST00000494610 A6NJY4 79 aa7.47□□□□□ -1.21
CSNK1E-212ENST00000494610 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
CSNK1E-212ENST00000494610 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
CSNK1E-212ENST00000494610 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
CSNK1E-212ENST00000494610 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
CSNK1E-212ENST00000494610 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
CSNK1E-212ENST00000494610 SMIM13P0DJ93 91 aa7.46□□□□□ -1.22
CSNK1E-212ENST00000494610 PFN2P35080 140 aa7.46□□□□□ -1.22
CSNK1E-212ENST00000494610 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
CSNK1E-212ENST00000494610 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
CSNK1E-212ENST00000494610 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
CSNK1E-212ENST00000494610 C10orf25Q5T742 122 aa7.45□□□□□ -1.22
CSNK1E-212ENST00000494610 LITAFQ99732 161 aa7.45□□□□□ -1.22
CSNK1E-212ENST00000494610 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
CSNK1E-212ENST00000494610 CTAG1AP78358 180 aa7.43□□□□□ -1.22
CSNK1E-212ENST00000494610 RPL18AQ02543 176 aaKnown RBP7.43□□□□□ -1.22
CSNK1E-212ENST00000494610 CEND1Q8N111 149 aa7.43□□□□□ -1.22
CSNK1E-212ENST00000494610 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 PCP4L1A6NKN8 68 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 CHTF8P0CG12 524 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 LINC00474Q9P2X8 69 aa7.42□□□□□ -1.22
CSNK1E-212ENST00000494610 LOC107984156A0A0G2JMH3 177 aa7.41□□□□□ -1.22
CSNK1E-212ENST00000494610 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
CSNK1E-212ENST00000494610 ARL17AQ8IVW1 177 aa7.41□□□□□ -1.22
CSNK1E-212ENST00000494610 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
CSNK1E-212ENST00000494610 A6NDN8 102 aa7.4□□□□□ -1.22
CSNK1E-212ENST00000494610 SLPIP03973 132 aa7.4□□□□□ -1.22
CSNK1E-212ENST00000494610 ADAMTSL4-AS1Q5T5F5 129 aa7.4□□□□□ -1.22
CSNK1E-212ENST00000494610 DAND5Q8N907 189 aa7.4□□□□□ -1.22
CSNK1E-212ENST00000494610 SND1-IT1Q9HBX3 110 aa7.4□□□□□ -1.22
CSNK1E-212ENST00000494610 NDUFC2O95298 119 aa7.39□□□□□ -1.23
CSNK1E-212ENST00000494610 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
CSNK1E-212ENST00000494610 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
CSNK1E-212ENST00000494610 BVES-AS1Q5T3Y7 98 aa7.38□□□□□ -1.23
CSNK1E-212ENST00000494610 Q6ZRP5 223 aa7.38□□□□□ -1.23
CSNK1E-212ENST00000494610 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
CSNK1E-212ENST00000494610 A0A087WYN8 130 aa7.37□□□□□ -1.23
CSNK1E-212ENST00000494610 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
CSNK1E-212ENST00000494610 NPC2P61916 151 aa7.37□□□□□ -1.23
CSNK1E-212ENST00000494610 GAGE2BQ13066 116 aa7.37□□□□□ -1.23
CSNK1E-212ENST00000494610 CBY1Q9Y3M2 126 aa7.37□□□□□ -1.23
CSNK1E-212ENST00000494610 MUC2Q02817 5179 aa7.36□□□□□ -1.23
CSNK1E-212ENST00000494610 A0A0B4J2C4 111 aa7.36□□□□□ -1.23
CSNK1E-212ENST00000494610 A4D1N5 150 aa7.36□□□□□ -1.23
CSNK1E-212ENST00000494610 DPH3Q96FX2 82 aa7.36□□□□□ -1.23
CSNK1E-212ENST00000494610 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 FXYD2P54710 66 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 BATFQ16520 125 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
CSNK1E-212ENST00000494610 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
CSNK1E-212ENST00000494610 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
CSNK1E-212ENST00000494610 A0A096LNI7 61 aa7.33□□□□□ -1.24
CSNK1E-212ENST00000494610 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
CSNK1E-212ENST00000494610 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 COL5A1-AS1Q5SY13 56 aa7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 LINC01600Q96MT4 127 aa7.32□□□□□ -1.24
CSNK1E-212ENST00000494610 VPREB1P12018 145 aa7.31□□□□□ -1.24
CSNK1E-212ENST00000494610 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
CSNK1E-212ENST00000494610 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
CSNK1E-212ENST00000494610 M0R378 163 aa7.3□□□□□ -1.24
CSNK1E-212ENST00000494610 CFC1BP0CG36 223 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms