RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 PMCHL2Q9BQD1 86 aa13.38□□□□□ -0.27
HPS3-207ENST00000494327 DPM2O94777 84 aa13.36□□□□□ -0.27
HPS3-207ENST00000494327 IGKCP01834 107 aa13.35□□□□□ -0.27
HPS3-207ENST00000494327 PLNP26678 52 aa13.35□□□□□ -0.27
HPS3-207ENST00000494327 AKR1D1P51857 326 aa13.35□□□□□ -0.27
HPS3-207ENST00000494327 MRPL55Q7Z7F7 128 aaKnown RBP13.35□□□□□ -0.27
HPS3-207ENST00000494327 ERG28Q9UKR5 140 aa13.35□□□□□ -0.27
HPS3-207ENST00000494327 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
HPS3-207ENST00000494327 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
HPS3-207ENST00000494327 SCGB1D1O95968 90 aa13.33□□□□□ -0.28
HPS3-207ENST00000494327 TP73-AS1Q9UF72 201 aa13.33□□□□□ -0.28
HPS3-207ENST00000494327 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
HPS3-207ENST00000494327 PLA2G2DQ9UNK4 145 aa13.32□□□□□ -0.28
HPS3-207ENST00000494327 RPL37AP8A6NKH3 93 aa13.31□□□□□ -0.28
HPS3-207ENST00000494327 NKAPP1Q8N9T2 125 aa13.31□□□□□ -0.28
HPS3-207ENST00000494327 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
HPS3-207ENST00000494327 H0Y9J4 135 aa13.3□□□□□ -0.28
HPS3-207ENST00000494327 KRTAP10-8P60410 259 aa13.3□□□□□ -0.28
HPS3-207ENST00000494327 JOSD1Q15040 202 aaPredicted RBP13.3□□□□□ -0.28
HPS3-207ENST00000494327 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
HPS3-207ENST00000494327 COX17Q14061 63 aa13.29□□□□□ -0.28
HPS3-207ENST00000494327 SND1-IT1Q9HBX3 110 aa13.29□□□□□ -0.28
HPS3-207ENST00000494327 LOC105371267A0A1B0GV96 52 aa13.28□□□□□ -0.28
HPS3-207ENST00000494327 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
HPS3-207ENST00000494327 LINC00158P58513 81 aa13.27□□□□□ -0.29
HPS3-207ENST00000494327 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
HPS3-207ENST00000494327 ATOH7Q8N100 152 aa13.26□□□□□ -0.29
HPS3-207ENST00000494327 ZNF861PO60384 105 aa13.24□□□□□ -0.29
HPS3-207ENST00000494327 HERVK_113P61574 105 aa13.24□□□□□ -0.29
HPS3-207ENST00000494327 PYY3Q5JQD4 70 aa13.23□□□□□ -0.29
HPS3-207ENST00000494327 BCE1O60756 84 aa13.22□□□□□ -0.29
HPS3-207ENST00000494327 VPREB1P12018 145 aa13.22□□□□□ -0.29
HPS3-207ENST00000494327 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
HPS3-207ENST00000494327 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
HPS3-207ENST00000494327 PRR26Q8N8Z3 221 aa13.22□□□□□ -0.29
HPS3-207ENST00000494327 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.29
HPS3-207ENST00000494327 IGKV2D-28P01615 120 aa13.21□□□□□ -0.29
HPS3-207ENST00000494327 HSBP1L1C9JCN9 74 aa13.2□□□□□ -0.3
HPS3-207ENST00000494327 SMIM13P0DJ93 91 aa13.2□□□□□ -0.3
HPS3-207ENST00000494327 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
HPS3-207ENST00000494327 HMCN2Q8NDA2 5059 aa13.2□□□□□ -0.3
HPS3-207ENST00000494327 TNXBP22105 4242 aa13.18□□□□□ -0.3
HPS3-207ENST00000494327 RPL28P46779 137 aaKnown RBP13.18□□□□□ -0.3
HPS3-207ENST00000494327 HERV-K104P63124 156 aa13.18□□□□□ -0.3
HPS3-207ENST00000494327 Q8NDZ9 215 aa13.18□□□□□ -0.3
HPS3-207ENST00000494327 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
HPS3-207ENST00000494327 E9PLD3 99 aa13.17□□□□□ -0.3
HPS3-207ENST00000494327 LEPROTO15243 131 aa13.17□□□□□ -0.3
HPS3-207ENST00000494327 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
HPS3-207ENST00000494327 PLEKHB2Q96CS7 222 aa13.17□□□□□ -0.3
HPS3-207ENST00000494327 TSPEAR-AS2P59090 65 aa13.16□□□□□ -0.3
HPS3-207ENST00000494327 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
HPS3-207ENST00000494327 UBE2AP49459 152 aa13.15□□□□□ -0.3
HPS3-207ENST00000494327 MIR7-3HGQ8N6C7 128 aa13.15□□□□□ -0.3
HPS3-207ENST00000494327 LINC00587B1AMM8 73 aa13.14□□□□□ -0.31
HPS3-207ENST00000494327 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
HPS3-207ENST00000494327 J3QQQ9 107 aa13.13□□□□□ -0.31
HPS3-207ENST00000494327 VAMP8Q9BV40 100 aa13.13□□□□□ -0.31
HPS3-207ENST00000494327 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
HPS3-207ENST00000494327 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
HPS3-207ENST00000494327 SMIM6P0DI80 62 aa13.11□□□□□ -0.31
HPS3-207ENST00000494327 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
HPS3-207ENST00000494327 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 NMUP48645 174 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 S100A12P80511 92 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 TMEM126AQ9H061 195 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 PAM16Q9Y3D7 125 aa13.1□□□□□ -0.31
HPS3-207ENST00000494327 M0R378 163 aa13.09□□□□□ -0.31
HPS3-207ENST00000494327 PRLHP81277 87 aa13.08□□□□□ -0.32
HPS3-207ENST00000494327 SPATA45Q537H7 98 aa13.08□□□□□ -0.32
HPS3-207ENST00000494327 NCR3O14931 201 aa13.07□□□□□ -0.32
HPS3-207ENST00000494327 KRTAP13-1Q8IUC0 172 aa13.07□□□□□ -0.32
HPS3-207ENST00000494327 DAND5Q8N907 189 aa13.07□□□□□ -0.32
HPS3-207ENST00000494327 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
HPS3-207ENST00000494327 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
HPS3-207ENST00000494327 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
HPS3-207ENST00000494327 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
HPS3-207ENST00000494327 ANAPC11Q9NYG5 84 aa13.03□□□□□ -0.32
HPS3-207ENST00000494327 COX8AP10176 69 aa13□□□□□ -0.33
HPS3-207ENST00000494327 C14orf144Q96I85 54 aa13□□□□□ -0.33
HPS3-207ENST00000494327 C12orf57Q99622 126 aa13□□□□□ -0.33
HPS3-207ENST00000494327 A0A087X002 238 aa12.99□□□□□ -0.33
HPS3-207ENST00000494327 CRYGAP11844 174 aa12.99□□□□□ -0.33
HPS3-207ENST00000494327 MIEN1Q9BRT3 115 aa12.99□□□□□ -0.33
HPS3-207ENST00000494327 A0A0J9YXY3 114 aa12.98□□□□□ -0.33
HPS3-207ENST00000494327 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
HPS3-207ENST00000494327 PRYO14603 147 aa12.97□□□□□ -0.33
HPS3-207ENST00000494327 LINC00518Q8N0U6 118 aa12.97□□□□□ -0.33
HPS3-207ENST00000494327 LOC107984156A0A0G2JMH3 177 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 TRBV10-3A0A0K0K1G6 114 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 DLEU1O43261 78 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 NPC2P61916 151 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 ARL17AQ8IVW1 177 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 TYMSOSQ8TAI1 123 aa12.96□□□□□ -0.33
HPS3-207ENST00000494327 SCGB1D4Q6XE38 83 aa12.95□□□□□ -0.34
HPS3-207ENST00000494327 ADAMTSL4-AS1Q5T5F5 129 aa12.94□□□□□ -0.34
HPS3-207ENST00000494327 KCNQ1DNQ9H478 68 aa12.94□□□□□ -0.34
HPS3-207ENST00000494327 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms