RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 HSPB8Q9UJY1 196 aa8.84□□□□□ -0.99
ATG4B-224ENST00000494132 BCE1O60756 84 aa8.83□□□□□ -1
ATG4B-224ENST00000494132 SFTA2Q6UW10 78 aa8.83□□□□□ -1
ATG4B-224ENST00000494132 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
ATG4B-224ENST00000494132 TMEM238C9JI98 176 aa8.8□□□□□ -1
ATG4B-224ENST00000494132 ATP6V1G1O75348 118 aa8.8□□□□□ -1
ATG4B-224ENST00000494132 DPM2O94777 84 aa8.8□□□□□ -1
ATG4B-224ENST00000494132 PLNP26678 52 aa8.8□□□□□ -1
ATG4B-224ENST00000494132 RPL28P46779 137 aaKnown RBP8.8□□□□□ -1
ATG4B-224ENST00000494132 RPL24P83731 157 aaKnown RBP8.8□□□□□ -1
ATG4B-224ENST00000494132 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
ATG4B-224ENST00000494132 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 LEPROTO15243 131 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 IGKCP01834 107 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 UBE2AP49459 152 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 PRLHP81277 87 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
ATG4B-224ENST00000494132 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
ATG4B-224ENST00000494132 HERV-K104P63124 156 aa8.78□□□□□ -1
ATG4B-224ENST00000494132 DAND5Q8N907 189 aa8.78□□□□□ -1
ATG4B-224ENST00000494132 FAM19A1Q7Z5A9 133 aa8.77□□□□□ -1.01
ATG4B-224ENST00000494132 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
ATG4B-224ENST00000494132 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
ATG4B-224ENST00000494132 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
ATG4B-224ENST00000494132 J3QQQ9 107 aa8.76□□□□□ -1.01
ATG4B-224ENST00000494132 NCR3O14931 201 aa8.76□□□□□ -1.01
ATG4B-224ENST00000494132 HERVK_113P61574 105 aa8.76□□□□□ -1.01
ATG4B-224ENST00000494132 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
ATG4B-224ENST00000494132 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
ATG4B-224ENST00000494132 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
ATG4B-224ENST00000494132 M0R378 163 aa8.75□□□□□ -1.01
ATG4B-224ENST00000494132 LGALS3P17931 250 aaKnown RBP8.75□□□□□ -1.01
ATG4B-224ENST00000494132 A0A087X002 238 aa8.74□□□□□ -1.01
ATG4B-224ENST00000494132 UBR4Q5T4S7 5183 aa8.71□□□□□ -1.01
ATG4B-224ENST00000494132 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
ATG4B-224ENST00000494132 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
ATG4B-224ENST00000494132 NPC2P61916 151 aa8.71□□□□□ -1.02
ATG4B-224ENST00000494132 LRP2P98164 4655 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 TRBV10-3A0A0K0K1G6 114 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 E9PLD3 99 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 C3orf79P0CE67 100 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 NMUP48645 174 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 HIGD2AQ9BW72 106 aa8.69□□□□□ -1.02
ATG4B-224ENST00000494132 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
ATG4B-224ENST00000494132 CRYGAP11844 174 aa8.68□□□□□ -1.02
ATG4B-224ENST00000494132 KRTDAPP60985 99 aa8.68□□□□□ -1.02
ATG4B-224ENST00000494132 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
ATG4B-224ENST00000494132 PRYO14603 147 aa8.67□□□□□ -1.02
ATG4B-224ENST00000494132 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
ATG4B-224ENST00000494132 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
ATG4B-224ENST00000494132 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
ATG4B-224ENST00000494132 TTTY13Q9BZ97 58 aa8.67□□□□□ -1.02
ATG4B-224ENST00000494132 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
ATG4B-224ENST00000494132 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-224ENST00000494132 TSPAN13O95857 204 aa8.66□□□□□ -1.02
ATG4B-224ENST00000494132 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
ATG4B-224ENST00000494132 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
ATG4B-224ENST00000494132 MIEN1Q9BRT3 115 aa8.66□□□□□ -1.02
ATG4B-224ENST00000494132 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
ATG4B-224ENST00000494132 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
ATG4B-224ENST00000494132 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
ATG4B-224ENST00000494132 LPAP08519 4548 aa8.64□□□□□ -1.03
ATG4B-224ENST00000494132 DDTP30046 118 aa8.63□□□□□ -1.03
ATG4B-224ENST00000494132 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
ATG4B-224ENST00000494132 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
ATG4B-224ENST00000494132 SPRR1AP35321 89 aa8.62□□□□□ -1.03
ATG4B-224ENST00000494132 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
ATG4B-224ENST00000494132 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-224ENST00000494132 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
ATG4B-224ENST00000494132 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
ATG4B-224ENST00000494132 LITAFQ99732 161 aa8.61□□□□□ -1.03
ATG4B-224ENST00000494132 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-224ENST00000494132 TRBV10-2A0A0K0K1G8 114 aa8.6□□□□□ -1.03
ATG4B-224ENST00000494132 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
ATG4B-224ENST00000494132 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
ATG4B-224ENST00000494132 NDUFC2O95298 119 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 S100A1P23297 94 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 PRR4Q16378 134 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
ATG4B-224ENST00000494132 C20orf202A1L168 122 aa8.58□□□□□ -1.04
ATG4B-224ENST00000494132 S100A12P80511 92 aa8.58□□□□□ -1.04
ATG4B-224ENST00000494132 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
ATG4B-224ENST00000494132 B5MCH6 92 aa8.57□□□□□ -1.04
ATG4B-224ENST00000494132 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
ATG4B-224ENST00000494132 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms