RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 DIRC1Q969H9 104 aa9.81□□□□□ -0.84
SATB1-217ENST00000493952 IGKCP01834 107 aa9.8□□□□□ -0.84
SATB1-217ENST00000493952 VPREB1P12018 145 aa9.8□□□□□ -0.84
SATB1-217ENST00000493952 LINC00158P58513 81 aa9.8□□□□□ -0.84
SATB1-217ENST00000493952 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
SATB1-217ENST00000493952 NDUFA12Q9UI09 145 aa9.8□□□□□ -0.84
SATB1-217ENST00000493952 H0Y9J4 135 aa9.79□□□□□ -0.84
SATB1-217ENST00000493952 LEPROTO15243 131 aa9.79□□□□□ -0.84
SATB1-217ENST00000493952 Q8NDZ9 215 aa9.79□□□□□ -0.84
SATB1-217ENST00000493952 SYS1-DBNDD2H3BUS1 97 aa9.78□□□□□ -0.84
SATB1-217ENST00000493952 SMIM13P0DJ93 91 aa9.78□□□□□ -0.84
SATB1-217ENST00000493952 HERV-K104P63124 156 aa9.78□□□□□ -0.84
SATB1-217ENST00000493952 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
SATB1-217ENST00000493952 COA6Q5JTJ3 125 aaKnown RBP9.78□□□□□ -0.84
SATB1-217ENST00000493952 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
SATB1-217ENST00000493952 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
SATB1-217ENST00000493952 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
SATB1-217ENST00000493952 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.85
SATB1-217ENST00000493952 ZNF861PO60384 105 aa9.76□□□□□ -0.85
SATB1-217ENST00000493952 BCE1O60756 84 aa9.76□□□□□ -0.85
SATB1-217ENST00000493952 HERVK_113P61574 105 aa9.76□□□□□ -0.85
SATB1-217ENST00000493952 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
SATB1-217ENST00000493952 J3QQQ9 107 aa9.75□□□□□ -0.85
SATB1-217ENST00000493952 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
SATB1-217ENST00000493952 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
SATB1-217ENST00000493952 ATP6V1G1O75348 118 aa9.74□□□□□ -0.85
SATB1-217ENST00000493952 S100A1P23297 94 aa9.74□□□□□ -0.85
SATB1-217ENST00000493952 LINC01545Q5VT33 79 aa9.74□□□□□ -0.85
SATB1-217ENST00000493952 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
SATB1-217ENST00000493952 KRTAP1-4P0C5Y4 121 aa9.73□□□□□ -0.85
SATB1-217ENST00000493952 LINC00587B1AMM8 73 aa9.72□□□□□ -0.85
SATB1-217ENST00000493952 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
SATB1-217ENST00000493952 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
SATB1-217ENST00000493952 E9PLD3 99 aa9.71□□□□□ -0.86
SATB1-217ENST00000493952 C3orf79P0CE67 100 aa9.71□□□□□ -0.86
SATB1-217ENST00000493952 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.86
SATB1-217ENST00000493952 NMUP48645 174 aa9.71□□□□□ -0.86
SATB1-217ENST00000493952 BOD1L2Q8IYS8 172 aa9.71□□□□□ -0.86
SATB1-217ENST00000493952 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
SATB1-217ENST00000493952 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
SATB1-217ENST00000493952 DAND5Q8N907 189 aa9.7□□□□□ -0.86
SATB1-217ENST00000493952 KRTAP13-1Q8IUC0 172 aa9.69□□□□□ -0.86
SATB1-217ENST00000493952 TMEM126AQ9H061 195 aa9.69□□□□□ -0.86
SATB1-217ENST00000493952 KRTDAPP60985 99 aa9.68□□□□□ -0.86
SATB1-217ENST00000493952 M0R378 163 aa9.67□□□□□ -0.86
SATB1-217ENST00000493952 NCR3O14931 201 aa9.67□□□□□ -0.86
SATB1-217ENST00000493952 UBE2AP49459 152 aa9.67□□□□□ -0.86
SATB1-217ENST00000493952 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
SATB1-217ENST00000493952 PRLHP81277 87 aa9.66□□□□□ -0.86
SATB1-217ENST00000493952 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
SATB1-217ENST00000493952 LOC107984156A0A0G2JMH3 177 aa9.65□□□□□ -0.86
SATB1-217ENST00000493952 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.86
SATB1-217ENST00000493952 ARL17AQ8IVW1 177 aa9.65□□□□□ -0.86
SATB1-217ENST00000493952 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
SATB1-217ENST00000493952 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
SATB1-217ENST00000493952 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 C20orf202A1L168 122 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 PRYO14603 147 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 NPC2P61916 151 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 SOSTDC1Q6X4U4 206 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 MIEN1Q9BRT3 115 aa9.61□□□□□ -0.87
SATB1-217ENST00000493952 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
SATB1-217ENST00000493952 RPL13AP40429 203 aaKnown RBP9.6□□□□□ -0.87
SATB1-217ENST00000493952 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
SATB1-217ENST00000493952 TTTY13Q9BZ97 58 aa9.6□□□□□ -0.87
SATB1-217ENST00000493952 A0A087X002 238 aa9.59□□□□□ -0.87
SATB1-217ENST00000493952 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
SATB1-217ENST00000493952 ATOH7Q8N100 152 aa9.59□□□□□ -0.87
SATB1-217ENST00000493952 LITAFQ99732 161 aa9.59□□□□□ -0.87
SATB1-217ENST00000493952 KCNQ1DNQ9H478 68 aa9.59□□□□□ -0.87
SATB1-217ENST00000493952 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
SATB1-217ENST00000493952 SPRR1AP35321 89 aa9.58□□□□□ -0.88
SATB1-217ENST00000493952 ANKRD39Q53RE8 183 aa9.58□□□□□ -0.88
SATB1-217ENST00000493952 HIST1H2BLQ99880 126 aa9.58□□□□□ -0.88
SATB1-217ENST00000493952 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
SATB1-217ENST00000493952 NDUFC2O95298 119 aa9.57□□□□□ -0.88
SATB1-217ENST00000493952 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
SATB1-217ENST00000493952 KRTAP4-16G5E9R7 235 aaPredicted RBP9.56□□□□□ -0.88
SATB1-217ENST00000493952 TIMM17BO60830 172 aa9.56□□□□□ -0.88
SATB1-217ENST00000493952 S100A2P29034 98 aa9.56□□□□□ -0.88
SATB1-217ENST00000493952 DDTP30046 118 aa9.56□□□□□ -0.88
SATB1-217ENST00000493952 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
SATB1-217ENST00000493952 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
SATB1-217ENST00000493952 CRYGAP11844 174 aa9.55□□□□□ -0.88
SATB1-217ENST00000493952 S100A6P06703 90 aa9.54□□□□□ -0.88
SATB1-217ENST00000493952 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
SATB1-217ENST00000493952 ETDCA0A1B0GVM5 59 aa9.53□□□□□ -0.88
SATB1-217ENST00000493952 AKR1D1P51857 326 aa9.53□□□□□ -0.88
SATB1-217ENST00000493952 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
SATB1-217ENST00000493952 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
SATB1-217ENST00000493952 S100A12P80511 92 aa9.52□□□□□ -0.89
SATB1-217ENST00000493952 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
SATB1-217ENST00000493952 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
SATB1-217ENST00000493952 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
SATB1-217ENST00000493952 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
SATB1-217ENST00000493952 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
SATB1-217ENST00000493952 B5MCH6 92 aa9.5□□□□□ -0.89
SATB1-217ENST00000493952 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
SATB1-217ENST00000493952 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
SATB1-217ENST00000493952 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms