RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 LINC00167Q96N53 147 aa13.92□□□□□ -0.18
RNF40-203ENST00000493683 C6orf48Q9UBA6 75 aa13.92□□□□□ -0.18
RNF40-203ENST00000493683 A0A1B0GU69 56 aa13.92□□□□□ -0.18
RNF40-203ENST00000493683 ADAMTS20P59510 1910 aa13.92□□□□□ -0.18
RNF40-203ENST00000493683 Q6ZQT0 140 aa13.91□□□□□ -0.18
RNF40-203ENST00000493683 FN1P02751 2386 aaKnown RBP13.9□□□□□ -0.18
RNF40-203ENST00000493683 Q8NBF4 154 aa13.89□□□□□ -0.19
RNF40-203ENST00000493683 TLN2Q9Y4G6 2542 aa13.88□□□□□ -0.19
RNF40-203ENST00000493683 C7orf65Q6ZTY9 151 aa13.88□□□□□ -0.19
RNF40-203ENST00000493683 FAM218AQ96MZ4 157 aa13.87□□□□□ -0.19
RNF40-203ENST00000493683 LRRK2Q5S007 2527 aa13.87□□□□□ -0.19
RNF40-203ENST00000493683 IGKV2D-30A0A075B6S6 120 aa13.86□□□□□ -0.19
RNF40-203ENST00000493683 IGKV2-30P06310 120 aa13.86□□□□□ -0.19
RNF40-203ENST00000493683 AGRNO00468 2067 aa13.85□□□□□ -0.19
RNF40-203ENST00000493683 Q6ZRX8 168 aa13.85□□□□□ -0.19
RNF40-203ENST00000493683 EXPH5Q8NEV8 1989 aa13.84□□□□□ -0.19
RNF40-203ENST00000493683 MOBPQ13875 183 aa13.8□□□□□ -0.2
RNF40-203ENST00000493683 SPAG11AQ6PDA7 123 aa13.8□□□□□ -0.2
RNF40-203ENST00000493683 GVQW2A0A096LPI5 108 aaPredicted RBP13.79□□□□□ -0.2
RNF40-203ENST00000493683 KLK9Q2XQG4 91 aa13.79□□□□□ -0.2
RNF40-203ENST00000493683 TRAV22A0A0B4J277 110 aa13.79□□□□□ -0.2
RNF40-203ENST00000493683 LINC00476Q8WZB0 136 aa13.79□□□□□ -0.2
RNF40-203ENST00000493683 Q9UF83 564 aa13.78□□□□□ -0.2
RNF40-203ENST00000493683 MDFIQ99750 246 aa13.76□□□□□ -0.21
RNF40-203ENST00000493683 ERC2-IT1O76042 136 aa13.75□□□□□ -0.21
RNF40-203ENST00000493683 USP9YO00507 2555 aaPredicted RBP13.74□□□□□ -0.21
RNF40-203ENST00000493683 TRBV7-4A0A0J9YYF1 115 aa13.73□□□□□ -0.21
RNF40-203ENST00000493683 C16orf90A8MZG2 172 aa13.73□□□□□ -0.21
RNF40-203ENST00000493683 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
RNF40-203ENST00000493683 SETD2Q9BYW2 2564 aaPredicted RBP13.72□□□□□ -0.21
RNF40-203ENST00000493683 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
RNF40-203ENST00000493683 SPACA4Q8TDM5 124 aa13.71□□□□□ -0.21
RNF40-203ENST00000493683 LOC101927531A0A1B0GV80 90 aa13.7□□□□□ -0.22
RNF40-203ENST00000493683 C4orf26Q17RF5 130 aa13.7□□□□□ -0.22
RNF40-203ENST00000493683 LITAFQ99732 161 aa13.7□□□□□ -0.22
RNF40-203ENST00000493683 LINC00313P59037 77 aa13.69□□□□□ -0.22
RNF40-203ENST00000493683 EPM2AB3EWF7 344 aa13.68□□□□□ -0.22
RNF40-203ENST00000493683 TM2D3Q9BRN9 247 aa13.68□□□□□ -0.22
RNF40-203ENST00000493683 IGLV6-57P01721 117 aa13.67□□□□□ -0.22
RNF40-203ENST00000493683 C8orf87E5RJ46 101 aa13.67□□□□□ -0.22
RNF40-203ENST00000493683 ANKRD11Q6UB99 2663 aaPredicted RBP13.66□□□□□ -0.22
RNF40-203ENST00000493683 MUC4Q99102 2169 aa13.66□□□□□ -0.22
RNF40-203ENST00000493683 Q6ZRP5 223 aa13.66□□□□□ -0.22
RNF40-203ENST00000493683 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
RNF40-203ENST00000493683 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
RNF40-203ENST00000493683 ATP11AUNQ6ZP68 121 aa13.64□□□□□ -0.23
RNF40-203ENST00000493683 PHF5AQ7RTV0 110 aaKnown RBP13.63□□□□□ -0.23
RNF40-203ENST00000493683 A8MWP4 228 aa13.63□□□□□ -0.23
RNF40-203ENST00000493683 Q8NAQ8 132 aa13.62□□□□□ -0.23
RNF40-203ENST00000493683 CYP4F30PQ9H0H9 118 aa13.61□□□□□ -0.23
RNF40-203ENST00000493683 TET2Q6N021 2002 aaPredicted RBP13.61□□□□□ -0.23
RNF40-203ENST00000493683 VPREB1P12018 145 aa13.61□□□□□ -0.23
RNF40-203ENST00000493683 FAM229AH3BQW9 127 aa13.6□□□□□ -0.23
RNF40-203ENST00000493683 NBDYA0A0U1RRE5 68 aa13.6□□□□□ -0.23
RNF40-203ENST00000493683 SERTAD4-AS1Q5TG53 156 aa13.6□□□□□ -0.23
RNF40-203ENST00000493683 ST20-AS1Q8NBB2 130 aa13.6□□□□□ -0.23
RNF40-203ENST00000493683 RTL8CO15255 209 aa13.59□□□□□ -0.23
RNF40-203ENST00000493683 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
RNF40-203ENST00000493683 DNAH10OSP0CZ25 163 aa13.57□□□□□ -0.24
RNF40-203ENST00000493683 LINC00588Q9Y4M8 146 aa13.55□□□□□ -0.24
RNF40-203ENST00000493683 TYMSOSQ8TAI1 123 aa13.55□□□□□ -0.24
RNF40-203ENST00000493683 PTPRBP23467 1997 aa13.54□□□□□ -0.24
RNF40-203ENST00000493683 MRPL34Q9BQ48 92 aaKnown RBP13.54□□□□□ -0.24
RNF40-203ENST00000493683 KCNQ1DNQ9H478 68 aa13.54□□□□□ -0.24
RNF40-203ENST00000493683 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
RNF40-203ENST00000493683 COL4A2P08572 1712 aa13.5□□□□□ -0.25
RNF40-203ENST00000493683 KRTAP24-1Q3LI83 254 aa13.5□□□□□ -0.25
RNF40-203ENST00000493683 MTORP42345 2549 aa13.5□□□□□ -0.25
RNF40-203ENST00000493683 IGLV1-50A0A075B6I6 118 aa13.5□□□□□ -0.25
RNF40-203ENST00000493683 K7EQZ3 153 aa13.48□□□□□ -0.25
RNF40-203ENST00000493683 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
RNF40-203ENST00000493683 COA5Q86WW8 74 aa13.48□□□□□ -0.25
RNF40-203ENST00000493683 EP400Q96L91 3159 aa13.48□□□□□ -0.25
RNF40-203ENST00000493683 KLKP1Q107X0 134 aa13.47□□□□□ -0.25
RNF40-203ENST00000493683 F8P00451 2351 aa13.45□□□□□ -0.26
RNF40-203ENST00000493683 UQCR11O14957 56 aa13.44□□□□□ -0.26
RNF40-203ENST00000493683 Q96NJ1 140 aa13.44□□□□□ -0.26
RNF40-203ENST00000493683 COL27A1Q8IZC6 1860 aaPredicted RBP13.43□□□□□ -0.26
RNF40-203ENST00000493683 CHTF8P0CG12 524 aa13.42□□□□□ -0.26
RNF40-203ENST00000493683 LINC01600Q96MT4 127 aa13.41□□□□□ -0.26
RNF40-203ENST00000493683 WDR87Q6ZQQ6 2873 aa13.41□□□□□ -0.26
RNF40-203ENST00000493683 PRR15Q8IV56 129 aa13.4□□□□□ -0.26
RNF40-203ENST00000493683 FASNP49327 2511 aaKnown RBP13.39□□□□□ -0.27
RNF40-203ENST00000493683 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
RNF40-203ENST00000493683 CSNK1G2-AS1Q8NCQ2 148 aa13.39□□□□□ -0.27
RNF40-203ENST00000493683 PRR34Q9NV39 138 aa13.39□□□□□ -0.27
RNF40-203ENST00000493683 A8MUN3 132 aa13.39□□□□□ -0.27
RNF40-203ENST00000493683 WWC2-AS2Q96NR7 200 aa13.38□□□□□ -0.27
RNF40-203ENST00000493683 IGFL1Q6UW32 110 aa13.37□□□□□ -0.27
RNF40-203ENST00000493683 C8orf17Q9NRJ1 99 aa13.36□□□□□ -0.27
RNF40-203ENST00000493683 PLA2G2DQ9UNK4 145 aa13.36□□□□□ -0.27
RNF40-203ENST00000493683 SPINT4Q6UDR6 99 aa13.36□□□□□ -0.27
RNF40-203ENST00000493683 FAM168BA1KXE4 195 aa13.35□□□□□ -0.27
RNF40-203ENST00000493683 SSBP3-AS1Q7Z2R9 100 aa13.35□□□□□ -0.27
RNF40-203ENST00000493683 IGLV8-61A0A075B6I0 122 aa13.34□□□□□ -0.27
RNF40-203ENST00000493683 PLA2G1BP04054 148 aaKnown RBP13.33□□□□□ -0.27
RNF40-203ENST00000493683 TLX1NBP0CAT3 122 aa13.32□□□□□ -0.28
RNF40-203ENST00000493683 A0A1B0GVX0 72 aa13.31□□□□□ -0.28
RNF40-203ENST00000493683 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
RNF40-203ENST00000493683 Q8N377 158 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms