RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 FAM19A1Q7Z5A9 133 aa8.14□□□□□ -1.11
IRF1-210ENST00000493208 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
IRF1-210ENST00000493208 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
IRF1-210ENST00000493208 VPREB1P12018 145 aa8.12□□□□□ -1.11
IRF1-210ENST00000493208 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
IRF1-210ENST00000493208 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 H0Y8G0 127 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 M0R378 163 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 TRGC2P03986 189 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 CBLN2Q8IUK8 224 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 PLEKHB2Q96CS7 222 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 YPEL4Q96NS1 127 aa8.11□□□□□ -1.11
IRF1-210ENST00000493208 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
IRF1-210ENST00000493208 PRR4Q16378 134 aa8.1□□□□□ -1.11
IRF1-210ENST00000493208 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
IRF1-210ENST00000493208 NDUFA12Q9UI09 145 aa8.1□□□□□ -1.11
IRF1-210ENST00000493208 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
IRF1-210ENST00000493208 CTAG1AP78358 180 aa8.09□□□□□ -1.11
IRF1-210ENST00000493208 BOD1L2Q8IYS8 172 aa8.09□□□□□ -1.11
IRF1-210ENST00000493208 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
IRF1-210ENST00000493208 NMUP48645 174 aa8.08□□□□□ -1.12
IRF1-210ENST00000493208 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 PRYO14603 147 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 DPM2O94777 84 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 SMIM13P0DJ93 91 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
IRF1-210ENST00000493208 LEPROTO15243 131 aa8.06□□□□□ -1.12
IRF1-210ENST00000493208 SERF1AO75920 110 aa8.06□□□□□ -1.12
IRF1-210ENST00000493208 LGALS3P17931 250 aaKnown RBP8.06□□□□□ -1.12
IRF1-210ENST00000493208 PRLHP81277 87 aa8.06□□□□□ -1.12
IRF1-210ENST00000493208 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
IRF1-210ENST00000493208 HIGD2AQ9BW72 106 aa8.06□□□□□ -1.12
IRF1-210ENST00000493208 ETDCA0A1B0GVM5 59 aa8.05□□□□□ -1.12
IRF1-210ENST00000493208 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
IRF1-210ENST00000493208 SCO1O75880 301 aa8.05□□□□□ -1.12
IRF1-210ENST00000493208 A0A087X002 238 aa8.04□□□□□ -1.12
IRF1-210ENST00000493208 TSPAN13O95857 204 aa8.04□□□□□ -1.12
IRF1-210ENST00000493208 IGKCP01834 107 aa8.04□□□□□ -1.12
IRF1-210ENST00000493208 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
IRF1-210ENST00000493208 J3QQQ9 107 aa8.03□□□□□ -1.12
IRF1-210ENST00000493208 FABP4P15090 132 aa8.03□□□□□ -1.12
IRF1-210ENST00000493208 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
IRF1-210ENST00000493208 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
IRF1-210ENST00000493208 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
IRF1-210ENST00000493208 LRP2P98164 4655 aa8.02□□□□□ -1.13
IRF1-210ENST00000493208 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
IRF1-210ENST00000493208 NCR3O14931 201 aa8.01□□□□□ -1.13
IRF1-210ENST00000493208 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
IRF1-210ENST00000493208 S100A7L2Q5SY68 101 aa8□□□□□ -1.13
IRF1-210ENST00000493208 SPANXB1Q9NS25 103 aaPredicted RBP8□□□□□ -1.13
IRF1-210ENST00000493208 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
IRF1-210ENST00000493208 JOSD1Q15040 202 aaPredicted RBP7.99□□□□□ -1.13
IRF1-210ENST00000493208 SLC7A5P1Q8MH63 180 aa7.99□□□□□ -1.13
IRF1-210ENST00000493208 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 COLCA2A8K830 154 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 DDTP30046 118 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
IRF1-210ENST00000493208 NDUFC2O95298 119 aa7.97□□□□□ -1.13
IRF1-210ENST00000493208 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
IRF1-210ENST00000493208 AKR1D1P51857 326 aa7.96□□□□□ -1.14
IRF1-210ENST00000493208 SPRR4Q96PI1 79 aa7.96□□□□□ -1.14
IRF1-210ENST00000493208 E9PLD3 99 aa7.95□□□□□ -1.14
IRF1-210ENST00000493208 SPRR1AP35321 89 aa7.95□□□□□ -1.14
IRF1-210ENST00000493208 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
IRF1-210ENST00000493208 Q8NDZ9 215 aa7.95□□□□□ -1.14
IRF1-210ENST00000493208 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
IRF1-210ENST00000493208 LINC00310P59036 64 aa7.94□□□□□ -1.14
IRF1-210ENST00000493208 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
IRF1-210ENST00000493208 C20orf202A1L168 122 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 DAND5Q8N907 189 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
IRF1-210ENST00000493208 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
IRF1-210ENST00000493208 Q6ZRX8 168 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
IRF1-210ENST00000493208 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
IRF1-210ENST00000493208 C5orf52A6NGY3 159 aa7.9□□□□□ -1.14
IRF1-210ENST00000493208 TIMM17BO60830 172 aa7.9□□□□□ -1.14
IRF1-210ENST00000493208 SPINK1P00995 79 aa7.9□□□□□ -1.14
IRF1-210ENST00000493208 SLC25A34Q6PIV7 304 aa7.9□□□□□ -1.14
IRF1-210ENST00000493208 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
IRF1-210ENST00000493208 B5MCH6 92 aa7.89□□□□□ -1.15
IRF1-210ENST00000493208 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
IRF1-210ENST00000493208 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms