RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 DAND5Q8N907 189 aa14.54□□□□□ -0.08
SCN5A-213ENST00000491944 PCP2Q8IVA1 136 aa14.53□□□□□ -0.08
SCN5A-213ENST00000491944 PLA2G1BP04054 148 aaKnown RBP14.52□□□□□ -0.08
SCN5A-213ENST00000491944 RPL37AP61513 92 aaKnown RBP14.52□□□□□ -0.08
SCN5A-213ENST00000491944 PLA2G2DQ9UNK4 145 aa14.52□□□□□ -0.08
SCN5A-213ENST00000491944 C22orf24Q9Y442 160 aa14.51□□□□□ -0.09
SCN5A-213ENST00000491944 SCGB1D4Q6XE38 83 aa14.5□□□□□ -0.09
SCN5A-213ENST00000491944 NKAPP1Q8N9T2 125 aa14.5□□□□□ -0.09
SCN5A-213ENST00000491944 RPL24P83731 157 aaKnown RBP14.48□□□□□ -0.09
SCN5A-213ENST00000491944 KRTAP4-5Q9BYR2 181 aa14.48□□□□□ -0.09
SCN5A-213ENST00000491944 HERC2O95714 4834 aa14.48□□□□□ -0.09
SCN5A-213ENST00000491944 TIMM17BO60830 172 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 UBE2BP63146 152 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 ADAMTSL4-AS1Q5T5F5 129 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 BOD1L2Q8IYS8 172 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 TP73-AS1Q9UF72 201 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 IGLV5-37A0A075B6J1 123 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 VPREB1P12018 145 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 LBHQ53QV2 105 aaPredicted RBP14.47□□□□□ -0.09
SCN5A-213ENST00000491944 MRPL55Q7Z7F7 128 aaKnown RBP14.47□□□□□ -0.09
SCN5A-213ENST00000491944 MIEN1Q9BRT3 115 aa14.47□□□□□ -0.09
SCN5A-213ENST00000491944 Q8NDZ9 215 aa14.46□□□□□ -0.1
SCN5A-213ENST00000491944 LITAFQ99732 161 aa14.46□□□□□ -0.1
SCN5A-213ENST00000491944 VAMP8Q9BV40 100 aa14.46□□□□□ -0.1
SCN5A-213ENST00000491944 NPC2P61916 151 aa14.45□□□□□ -0.1
SCN5A-213ENST00000491944 PYY3Q5JQD4 70 aa14.45□□□□□ -0.1
SCN5A-213ENST00000491944 PAM16Q9Y3D7 125 aa14.45□□□□□ -0.1
SCN5A-213ENST00000491944 GAGE10A6NGK3 116 aa14.44□□□□□ -0.1
SCN5A-213ENST00000491944 PRR3P79522 188 aaKnown RBP14.43□□□□□ -0.1
SCN5A-213ENST00000491944 SPATA45Q537H7 98 aa14.43□□□□□ -0.1
SCN5A-213ENST00000491944 TMEM238C9JI98 176 aa14.42□□□□□ -0.1
SCN5A-213ENST00000491944 KRTAP11-1Q8IUC1 163 aa14.42□□□□□ -0.1
SCN5A-213ENST00000491944 LINC00167Q96N53 147 aa14.42□□□□□ -0.1
SCN5A-213ENST00000491944 PSORS1C2Q9UIG4 136 aa14.42□□□□□ -0.1
SCN5A-213ENST00000491944 KRTAP10-4P60372 401 aaPredicted RBP14.41□□□□□ -0.1
SCN5A-213ENST00000491944 LOC107984156A0A0G2JMH3 177 aa14.4□□□□□ -0.1
SCN5A-213ENST00000491944 RPL37AP8A6NKH3 93 aa14.4□□□□□ -0.1
SCN5A-213ENST00000491944 SOSTDC1Q6X4U4 206 aa14.4□□□□□ -0.1
SCN5A-213ENST00000491944 ARL17AQ8IVW1 177 aa14.4□□□□□ -0.1
SCN5A-213ENST00000491944 FAT1Q14517 4588 aa14.39□□□□□ -0.11
SCN5A-213ENST00000491944 NCR3O14931 201 aa14.39□□□□□ -0.11
SCN5A-213ENST00000491944 EIF4EBP3O60516 100 aaPredicted RBP14.38□□□□□ -0.11
SCN5A-213ENST00000491944 COX8AP10176 69 aa14.38□□□□□ -0.11
SCN5A-213ENST00000491944 LINC00308Q8TCZ7 52 aa14.38□□□□□ -0.11
SCN5A-213ENST00000491944 SRRM2Q9UQ35 2752 aaKnown RBP14.37□□□□□ -0.11
SCN5A-213ENST00000491944 C1orf137Q5JT78 98 aa14.37□□□□□ -0.11
SCN5A-213ENST00000491944 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
SCN5A-213ENST00000491944 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
SCN5A-213ENST00000491944 M0R378 163 aa14.36□□□□□ -0.11
SCN5A-213ENST00000491944 C14orf144Q96I85 54 aa14.36□□□□□ -0.11
SCN5A-213ENST00000491944 IGKV2-28A0A075B6P5 120 aa14.35□□□□□ -0.11
SCN5A-213ENST00000491944 IGKV2D-28P01615 120 aa14.35□□□□□ -0.11
SCN5A-213ENST00000491944 VPS13BQ7Z7G8 4022 aa14.34□□□□□ -0.11
SCN5A-213ENST00000491944 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.12
SCN5A-213ENST00000491944 SPANXB1Q9NS25 103 aaPredicted RBP14.33□□□□□ -0.12
SCN5A-213ENST00000491944 NDUFC2O95298 119 aa14.32□□□□□ -0.12
SCN5A-213ENST00000491944 Q6ZVH6 145 aa14.32□□□□□ -0.12
SCN5A-213ENST00000491944 COPS9Q8WXC6 57 aa14.32□□□□□ -0.12
SCN5A-213ENST00000491944 IGLV1-50A0A075B6I6 118 aa14.31□□□□□ -0.12
SCN5A-213ENST00000491944 DLEU1O43261 78 aa14.31□□□□□ -0.12
SCN5A-213ENST00000491944 HNRNPA3P51991 378 aaKnown RBP14.31□□□□□ -0.12
SCN5A-213ENST00000491944 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCN5A-213ENST00000491944 IFITM1P13164 125 aa14.3□□□□□ -0.12
SCN5A-213ENST00000491944 SLC25A34Q6PIV7 304 aa14.29□□□□□ -0.12
SCN5A-213ENST00000491944 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
SCN5A-213ENST00000491944 S100A12P80511 92 aa14.27□□□□□ -0.12
SCN5A-213ENST00000491944 MUSTN1Q8IVN3 82 aa14.27□□□□□ -0.12
SCN5A-213ENST00000491944 TRBV10-3A0A0K0K1G6 114 aa14.26□□□□□ -0.13
SCN5A-213ENST00000491944 IGLV7-43P04211 117 aa14.26□□□□□ -0.13
SCN5A-213ENST00000491944 BCE1O60756 84 aa14.24□□□□□ -0.13
SCN5A-213ENST00000491944 DDTP30046 118 aa14.24□□□□□ -0.13
SCN5A-213ENST00000491944 S100A7L2Q5SY68 101 aa14.24□□□□□ -0.13
SCN5A-213ENST00000491944 REG3GQ6UW15 175 aa14.24□□□□□ -0.13
SCN5A-213ENST00000491944 TMEM126AQ9H061 195 aa14.23□□□□□ -0.13
SCN5A-213ENST00000491944 PPDPFQ9H3Y8 114 aa14.23□□□□□ -0.13
SCN5A-213ENST00000491944 HIST1H4GQ99525 98 aa14.22□□□□□ -0.13
SCN5A-213ENST00000491944 LOC105371267A0A1B0GV96 52 aa14.22□□□□□ -0.13
SCN5A-213ENST00000491944 PRYO14603 147 aa14.21□□□□□ -0.14
SCN5A-213ENST00000491944 LINC00518Q8N0U6 118 aa14.21□□□□□ -0.14
SCN5A-213ENST00000491944 OR13C6PQ8NH95 151 aa14.21□□□□□ -0.14
SCN5A-213ENST00000491944 HIGD1BQ9P298 99 aa14.21□□□□□ -0.14
SCN5A-213ENST00000491944 SMIM6P0DI80 62 aa14.2□□□□□ -0.14
SCN5A-213ENST00000491944 SPINK6Q6UWN8 80 aa14.2□□□□□ -0.14
SCN5A-213ENST00000491944 IGLV6-57P01721 117 aa14.19□□□□□ -0.14
SCN5A-213ENST00000491944 UBE2AP49459 152 aa14.19□□□□□ -0.14
SCN5A-213ENST00000491944 C2orf91Q6ZV80 131 aa14.19□□□□□ -0.14
SCN5A-213ENST00000491944 KCNQ1DNQ9H478 68 aa14.19□□□□□ -0.14
SCN5A-213ENST00000491944 FLG2Q5D862 2391 aaPredicted RBP14.18□□□□□ -0.14
SCN5A-213ENST00000491944 FAM19A1Q7Z5A9 133 aa14.17□□□□□ -0.14
SCN5A-213ENST00000491944 ZNF861PO60384 105 aa14.16□□□□□ -0.14
SCN5A-213ENST00000491944 RPL28P46779 137 aaKnown RBP14.16□□□□□ -0.14
SCN5A-213ENST00000491944 LINC00337Q8N6G1 96 aa14.16□□□□□ -0.14
SCN5A-213ENST00000491944 DIRC1Q969H9 104 aa14.15□□□□□ -0.14
SCN5A-213ENST00000491944 TRAV23DV6A0A075B6W5 121 aa14.14□□□□□ -0.15
SCN5A-213ENST00000491944 ABCA13Q86UQ4 5058 aa14.13□□□□□ -0.15
SCN5A-213ENST00000491944 A4D1N5 150 aa14.13□□□□□ -0.15
SCN5A-213ENST00000491944 PRLHP81277 87 aa14.13□□□□□ -0.15
SCN5A-213ENST00000491944 UQCR10Q9UDW1 63 aa14.13□□□□□ -0.15
SCN5A-213ENST00000491944 ETDCA0A1B0GVM5 59 aa14.12□□□□□ -0.15
SCN5A-213ENST00000491944 CBY1Q9Y3M2 126 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms