RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
NCSTN-214ENST00000491390 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
NCSTN-214ENST00000491390 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
NCSTN-214ENST00000491390 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
NCSTN-214ENST00000491390 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
NCSTN-214ENST00000491390 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
NCSTN-214ENST00000491390 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 K7ERJ3 54 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 Q6ZRP5 223 aa6.82□□□□□ -1.32
NCSTN-214ENST00000491390 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 LEPROTO15243 131 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 UBE2D1P51668 147 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
NCSTN-214ENST00000491390 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
NCSTN-214ENST00000491390 F8W1H4 67 aa6.8□□□□□ -1.32
NCSTN-214ENST00000491390 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
NCSTN-214ENST00000491390 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
NCSTN-214ENST00000491390 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
NCSTN-214ENST00000491390 TMEM170BQ5T4T1 132 aa6.8□□□□□ -1.32
NCSTN-214ENST00000491390 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
NCSTN-214ENST00000491390 IGLV4-3A0A075B6K6 122 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 H7C423 109 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 J3QQQ9 107 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
NCSTN-214ENST00000491390 TMEM101Q96IK0 257 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 VCX2Q9H322 139 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 SPANXA1Q9NS26 97 aa6.79□□□□□ -1.32
NCSTN-214ENST00000491390 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
NCSTN-214ENST00000491390 PCP4P48539 62 aa6.78□□□□□ -1.32
NCSTN-214ENST00000491390 SS18Q15532 418 aa6.78□□□□□ -1.32
NCSTN-214ENST00000491390 PHF5AQ7RTV0 110 aaKnown RBP6.78□□□□□ -1.32
NCSTN-214ENST00000491390 AMELXQ99217 191 aa6.78□□□□□ -1.32
NCSTN-214ENST00000491390 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
NCSTN-214ENST00000491390 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
NCSTN-214ENST00000491390 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
NCSTN-214ENST00000491390 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
NCSTN-214ENST00000491390 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
NCSTN-214ENST00000491390 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
NCSTN-214ENST00000491390 CDC42SE2Q9NRR3 84 aa6.77□□□□□ -1.33
NCSTN-214ENST00000491390 J3QR89 54 aa6.76□□□□□ -1.33
NCSTN-214ENST00000491390 MRPS36P82909 103 aaKnown RBP6.76□□□□□ -1.33
NCSTN-214ENST00000491390 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
NCSTN-214ENST00000491390 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
NCSTN-214ENST00000491390 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
NCSTN-214ENST00000491390 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
NCSTN-214ENST00000491390 TINCRA0A1B0GVN0 87 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 TMEM238C9JI98 176 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 MALP21145 153 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
NCSTN-214ENST00000491390 TRBV20-1A0A075B6N2 111 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 TSPAN13O95857 204 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
NCSTN-214ENST00000491390 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 PKIGQ9Y2B9 76 aa6.74□□□□□ -1.33
NCSTN-214ENST00000491390 FAM168BA1KXE4 195 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 COX7A2LO14548 114 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 APOMO95445 188 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 Q6ZUT4 128 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
NCSTN-214ENST00000491390 H3BMG7 143 aa6.72□□□□□ -1.33
NCSTN-214ENST00000491390 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
NCSTN-214ENST00000491390 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 TIMM17BO60830 172 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 CFC1BP0CG36 223 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 CFC1P0CG37 223 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
NCSTN-214ENST00000491390 IGLV5-45A0A087WSX0 123 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 A0A087WZ39 114 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 IGLV7-43P04211 117 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
NCSTN-214ENST00000491390 GEMIN7Q9H840 131 aaKnown RBP6.7□□□□□ -1.34
NCSTN-214ENST00000491390 A4D1N5 150 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 M0QXV9 152 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 FAM19A5Q7Z5A7 132 aaPredicted RBP6.69□□□□□ -1.34
NCSTN-214ENST00000491390 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 C2orf48Q96LS8 159 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 NDUFA12Q9UI09 145 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
NCSTN-214ENST00000491390 CSDC2Q9Y534 153 aaKnown RBP6.69□□□□□ -1.34
NCSTN-214ENST00000491390 IFITM1P13164 125 aa6.68□□□□□ -1.34
NCSTN-214ENST00000491390 PSMB2P49721 201 aa6.68□□□□□ -1.34
NCSTN-214ENST00000491390 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
NCSTN-214ENST00000491390 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
NCSTN-214ENST00000491390 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms