RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 COPZ2Q9P299 210 aa1.38□□□□□ -2.19
PTPRC-212ENST00000491302 CCDC179H3BU77 68 aa1.37□□□□□ -2.19
PTPRC-212ENST00000491302 NCR2O95944 276 aa1.37□□□□□ -2.19
PTPRC-212ENST00000491302 MPC1LP0DKB6 136 aa1.37□□□□□ -2.19
PTPRC-212ENST00000491302 DCDP81605 110 aaKnown RBP1.37□□□□□ -2.19
PTPRC-212ENST00000491302 ERG28Q9UKR5 140 aa1.37□□□□□ -2.19
PTPRC-212ENST00000491302 SMCO1Q147U7 214 aa1.36□□□□□ -2.19
PTPRC-212ENST00000491302 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
PTPRC-212ENST00000491302 COA4Q9NYJ1 87 aa1.36□□□□□ -2.19
PTPRC-212ENST00000491302 LYNX1G3V0Z9 82 aa1.35□□□□□ -2.19
PTPRC-212ENST00000491302 SPINK7P58062 85 aa1.35□□□□□ -2.19
PTPRC-212ENST00000491302 CTAGE3PQ8IX95 158 aa1.35□□□□□ -2.19
PTPRC-212ENST00000491302 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
PTPRC-212ENST00000491302 SLC25A6P12236 298 aa1.34□□□□□ -2.19
PTPRC-212ENST00000491302 HAMPP81172 84 aa1.34□□□□□ -2.19
PTPRC-212ENST00000491302 SMIM21Q3B7S5 101 aa1.34□□□□□ -2.19
PTPRC-212ENST00000491302 TMEM141Q96I45 108 aa1.34□□□□□ -2.19
PTPRC-212ENST00000491302 TNCP24821 2201 aa1.34□□□□□ -2.2
PTPRC-212ENST00000491302 TRAV12-2A0A075B6T6 113 aa1.33□□□□□ -2.2
PTPRC-212ENST00000491302 NCMAPQ5T1S8 102 aa1.33□□□□□ -2.2
PTPRC-212ENST00000491302 DEFB112Q30KQ8 113 aa1.32□□□□□ -2.2
PTPRC-212ENST00000491302 DSCR8Q96T75 97 aa1.32□□□□□ -2.2
PTPRC-212ENST00000491302 FAM103A1Q9BTL3 118 aaKnown RBP1.32□□□□□ -2.2
PTPRC-212ENST00000491302 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
PTPRC-212ENST00000491302 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 TCRBV3S1A0A5B6 114 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 PYYP10082 97 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 BET1LQ9NYM9 111 aa1.31□□□□□ -2.2
PTPRC-212ENST00000491302 FAM92AA1XBS5 289 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 ZNF670-ZNF695F2Z2N8 137 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 TFF1P04155 84 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 LINC00694P0DN24 101 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 SPCS2Q15005 226 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 DEFB110Q30KQ9 67 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 OR2T2Q6IF00 324 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 PLAC8Q9NZF1 115 aa1.3□□□□□ -2.2
PTPRC-212ENST00000491302 UQCRHLA0A096LP55 91 aa1.28□□□□□ -2.2
PTPRC-212ENST00000491302 K7ERU9 68 aa1.28□□□□□ -2.2
PTPRC-212ENST00000491302 COX4I1P13073 169 aa1.28□□□□□ -2.2
PTPRC-212ENST00000491302 VSTM2AQ8TAG5 236 aa1.28□□□□□ -2.2
PTPRC-212ENST00000491302 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
PTPRC-212ENST00000491302 MDN1Q9NU22 5596 aa1.27□□□□□ -2.21
PTPRC-212ENST00000491302 MCRIP1C9JLW8 97 aa1.27□□□□□ -2.21
PTPRC-212ENST00000491302 CYP2G1PQ6ZSU1 146 aa1.27□□□□□ -2.21
PTPRC-212ENST00000491302 DEFB108BQ8NET1 73 aa1.27□□□□□ -2.21
PTPRC-212ENST00000491302 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
PTPRC-212ENST00000491302 IFI27L1Q96BM0 104 aa1.26□□□□□ -2.21
PTPRC-212ENST00000491302 DNAH8Q96JB1 4490 aa1.26□□□□□ -2.21
PTPRC-212ENST00000491302 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
PTPRC-212ENST00000491302 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
PTPRC-212ENST00000491302 PFDN5Q99471 154 aa1.25□□□□□ -2.21
PTPRC-212ENST00000491302 M0R129 80 aa1.24□□□□□ -2.21
PTPRC-212ENST00000491302 SPANXN1Q5VSR9 72 aa1.24□□□□□ -2.21
PTPRC-212ENST00000491302 APLNQ9ULZ1 77 aa1.24□□□□□ -2.21
PTPRC-212ENST00000491302 H3BSH0 61 aa1.23□□□□□ -2.21
PTPRC-212ENST00000491302 MIC13Q5XKP0 118 aa1.23□□□□□ -2.21
PTPRC-212ENST00000491302 SCIMPQ6UWF3 145 aa1.23□□□□□ -2.21
PTPRC-212ENST00000491302 PAIP2BQ9ULR5 123 aaKnown RBP1.23□□□□□ -2.21
PTPRC-212ENST00000491302 RBAKDNA6NC62 111 aa1.22□□□□□ -2.21
PTPRC-212ENST00000491302 NPFFO15130 113 aa1.22□□□□□ -2.21
PTPRC-212ENST00000491302 TSKUQ8WUA8 353 aa1.22□□□□□ -2.21
PTPRC-212ENST00000491302 PSMG3Q9BT73 122 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-212ENST00000491302 NDUFA12Q9UI09 145 aa1.22□□□□□ -2.21
PTPRC-212ENST00000491302 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
PTPRC-212ENST00000491302 DYNLRB1Q9NP97 96 aa1.21□□□□□ -2.22
PTPRC-212ENST00000491302 SPRR2EP22531 72 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 SPRR2BP35325 72 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 SPRR2AP35326 72 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 RPS25P62851 125 aaKnown RBP1.2□□□□□ -2.22
PTPRC-212ENST00000491302 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 UBE2DNLQ8IWF7 75 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 DPH3P1Q9H4G8 78 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 TPT1P8Q9HAU6 139 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 MUC17Q685J3 4493 aa1.2□□□□□ -2.22
PTPRC-212ENST00000491302 ATP6V1G2-DDX39BF2Z307 99 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 COPZ1P61923 177 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 RRAS2P62070 204 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-212ENST00000491302 EMX2Q04743 252 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 Q6ZUT4 128 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 COX14Q96I36 57 aa1.19□□□□□ -2.22
PTPRC-212ENST00000491302 M0R2T5 61 aa1.18□□□□□ -2.22
PTPRC-212ENST00000491302 MT1HP80294 61 aa1.18□□□□□ -2.22
PTPRC-212ENST00000491302 TRAV12-3A0A0B4J271 114 aa1.17□□□□□ -2.22
PTPRC-212ENST00000491302 PIRTP0C851 137 aa1.17□□□□□ -2.22
PTPRC-212ENST00000491302 SSBP1Q04837 148 aaKnown RBP1.17□□□□□ -2.22
PTPRC-212ENST00000491302 SLC48A1Q6P1K1 146 aa1.17□□□□□ -2.22
PTPRC-212ENST00000491302 TSLPQ969D9 159 aa1.17□□□□□ -2.22
PTPRC-212ENST00000491302 H3BUX3 64 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 IFNA17P01571 189 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 PRH1P02810 166 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 CCL3L1P16619 93 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 SPRR2DP22532 72 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 GUCA1AP43080 201 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-212ENST00000491302 NPC2P61916 151 aa1.16□□□□□ -2.22
PTPRC-212ENST00000491302 F2Z2F3 143 aa1.15□□□□□ -2.23
PTPRC-212ENST00000491302 S100A12P80511 92 aa1.15□□□□□ -2.23
PTPRC-212ENST00000491302 FAM74A4Q5TZK3 123 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms