RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
TRAIP-211ENST00000491060 SERF1AO75920 110 aa8.11□□□□□ -1.11
TRAIP-211ENST00000491060 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
TRAIP-211ENST00000491060 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
TRAIP-211ENST00000491060 LRP2P98164 4655 aa8.11□□□□□ -1.11
TRAIP-211ENST00000491060 VPREB1P12018 145 aa8.1□□□□□ -1.11
TRAIP-211ENST00000491060 IGLV5-37A0A075B6J1 123 aa8.09□□□□□ -1.11
TRAIP-211ENST00000491060 A0A087X002 238 aa8.09□□□□□ -1.11
TRAIP-211ENST00000491060 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
TRAIP-211ENST00000491060 NCR3O14931 201 aa8.09□□□□□ -1.11
TRAIP-211ENST00000491060 PRR4Q16378 134 aa8.09□□□□□ -1.11
TRAIP-211ENST00000491060 LINC00310P59036 64 aa8.08□□□□□ -1.12
TRAIP-211ENST00000491060 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
TRAIP-211ENST00000491060 LPAP08519 4548 aa8.07□□□□□ -1.12
TRAIP-211ENST00000491060 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
TRAIP-211ENST00000491060 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
TRAIP-211ENST00000491060 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
TRAIP-211ENST00000491060 DAND5Q8N907 189 aa8.06□□□□□ -1.12
TRAIP-211ENST00000491060 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
TRAIP-211ENST00000491060 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 COX17Q14061 63 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
TRAIP-211ENST00000491060 M0R378 163 aa8.04□□□□□ -1.12
TRAIP-211ENST00000491060 CRYGAP11844 174 aa8.04□□□□□ -1.12
TRAIP-211ENST00000491060 COLCA2A8K830 154 aa8.03□□□□□ -1.12
TRAIP-211ENST00000491060 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
TRAIP-211ENST00000491060 NPC2P61916 151 aa8.02□□□□□ -1.13
TRAIP-211ENST00000491060 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
TRAIP-211ENST00000491060 SFTA2Q6UW10 78 aa8.02□□□□□ -1.13
TRAIP-211ENST00000491060 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
TRAIP-211ENST00000491060 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
TRAIP-211ENST00000491060 HSPB8Q9UJY1 196 aa8.01□□□□□ -1.13
TRAIP-211ENST00000491060 LEPROTO15243 131 aa8□□□□□ -1.13
TRAIP-211ENST00000491060 DPM2O94777 84 aa8□□□□□ -1.13
TRAIP-211ENST00000491060 LGALS3P17931 250 aaKnown RBP7.99□□□□□ -1.13
TRAIP-211ENST00000491060 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 J3QQQ9 107 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 IGKCP01834 107 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 HERVK_113P61574 105 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 HERV-K104P63124 156 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 C3orf22Q8N5N4 141 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
TRAIP-211ENST00000491060 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
TRAIP-211ENST00000491060 PLNP26678 52 aa7.97□□□□□ -1.13
TRAIP-211ENST00000491060 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
TRAIP-211ENST00000491060 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
TRAIP-211ENST00000491060 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
TRAIP-211ENST00000491060 PRYO14603 147 aa7.94□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BKO60814 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BJP06899 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BOP23527 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BBP33778 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BDP58876 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BCP62807 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST2H2BEQ16778 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.93□□□□□ -1.14
TRAIP-211ENST00000491060 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BHQ93079 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BNQ99877 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 HIST1H2BMQ99879 126 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
TRAIP-211ENST00000491060 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
TRAIP-211ENST00000491060 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
TRAIP-211ENST00000491060 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
TRAIP-211ENST00000491060 DDTP30046 118 aa7.91□□□□□ -1.14
TRAIP-211ENST00000491060 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
TRAIP-211ENST00000491060 SYS1-DBNDD2H3BUS1 97 aa7.9□□□□□ -1.14
TRAIP-211ENST00000491060 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
TRAIP-211ENST00000491060 S100A7L2Q5SY68 101 aa7.9□□□□□ -1.14
TRAIP-211ENST00000491060 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
TRAIP-211ENST00000491060 GAGE2AQ6NT46 116 aa7.9□□□□□ -1.14
TRAIP-211ENST00000491060 S100A12P80511 92 aa7.89□□□□□ -1.15
TRAIP-211ENST00000491060 SOSTDC1Q6X4U4 206 aa7.89□□□□□ -1.15
TRAIP-211ENST00000491060 TTTY13Q9BZ97 58 aa7.89□□□□□ -1.15
TRAIP-211ENST00000491060 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
TRAIP-211ENST00000491060 ERC2-IT1O76042 136 aa7.88□□□□□ -1.15
TRAIP-211ENST00000491060 NMUP48645 174 aa7.88□□□□□ -1.15
TRAIP-211ENST00000491060 KRTDAPP60985 99 aa7.88□□□□□ -1.15
TRAIP-211ENST00000491060 IGLV9-49A0A0B4J1Y8 123 aa7.87□□□□□ -1.15
TRAIP-211ENST00000491060 E9PLD3 99 aa7.87□□□□□ -1.15
TRAIP-211ENST00000491060 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
TRAIP-211ENST00000491060 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
TRAIP-211ENST00000491060 B5MCH6 92 aa7.86□□□□□ -1.15
TRAIP-211ENST00000491060 SPRR1AP35321 89 aa7.86□□□□□ -1.15
TRAIP-211ENST00000491060 Q8NBF4 154 aa7.86□□□□□ -1.15
TRAIP-211ENST00000491060 SPANXB1Q9NS25 103 aaPredicted RBP7.86□□□□□ -1.15
TRAIP-211ENST00000491060 C3orf79P0CE67 100 aa7.85□□□□□ -1.15
TRAIP-211ENST00000491060 ATOH7Q8N100 152 aa7.85□□□□□ -1.15
TRAIP-211ENST00000491060 OR13C6PQ8NH95 151 aa7.85□□□□□ -1.15
TRAIP-211ENST00000491060 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
TRAIP-211ENST00000491060 TRAV23DV6A0A075B6W5 121 aa7.84□□□□□ -1.15
TRAIP-211ENST00000491060 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
TRAIP-211ENST00000491060 KRTAP4-16G5E9R7 235 aaPredicted RBP7.84□□□□□ -1.15
TRAIP-211ENST00000491060 MOBPQ13875 183 aa7.83□□□□□ -1.16
TRAIP-211ENST00000491060 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms