RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
LIMK1-207ENST00000491052 C1orf137Q5JT78 98 aa7.93□□□□□ -1.14
LIMK1-207ENST00000491052 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
LIMK1-207ENST00000491052 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
LIMK1-207ENST00000491052 HIST3H2BBQ8N257 126 aa7.93□□□□□ -1.14
LIMK1-207ENST00000491052 NKAPP1Q8N9T2 125 aa7.93□□□□□ -1.14
LIMK1-207ENST00000491052 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
LIMK1-207ENST00000491052 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
LIMK1-207ENST00000491052 E9PLD3 99 aa7.92□□□□□ -1.14
LIMK1-207ENST00000491052 TP73-AS1Q9UF72 201 aa7.92□□□□□ -1.14
LIMK1-207ENST00000491052 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
LIMK1-207ENST00000491052 LINC00587B1AMM8 73 aa7.91□□□□□ -1.14
LIMK1-207ENST00000491052 NMUP48645 174 aa7.91□□□□□ -1.14
LIMK1-207ENST00000491052 HIST1H2BLQ99880 126 aa7.91□□□□□ -1.14
LIMK1-207ENST00000491052 PKHD1L1Q86WI1 4243 aa7.91□□□□□ -1.14
LIMK1-207ENST00000491052 IGLV5-37A0A075B6J1 123 aa7.9□□□□□ -1.14
LIMK1-207ENST00000491052 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
LIMK1-207ENST00000491052 MIR7-3HGQ8N6C7 128 aa7.9□□□□□ -1.14
LIMK1-207ENST00000491052 J3QL48 77 aa7.89□□□□□ -1.15
LIMK1-207ENST00000491052 VPREB1P12018 145 aa7.89□□□□□ -1.15
LIMK1-207ENST00000491052 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
LIMK1-207ENST00000491052 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
LIMK1-207ENST00000491052 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
LIMK1-207ENST00000491052 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
LIMK1-207ENST00000491052 SNRPEP62304 92 aaKnown RBP7.88□□□□□ -1.15
LIMK1-207ENST00000491052 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
LIMK1-207ENST00000491052 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
LIMK1-207ENST00000491052 DAND5Q8N907 189 aa7.87□□□□□ -1.15
LIMK1-207ENST00000491052 Q8NDZ9 215 aa7.87□□□□□ -1.15
LIMK1-207ENST00000491052 IGKV2D-26A0A0A0MRZ7 120 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 A0A0J9YXY3 114 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 OXTP01178 125 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 AKR1D1P51857 326 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 SRSF9Q13242 221 aaKnown RBP eCLIP7.86□□□□□ -1.15
LIMK1-207ENST00000491052 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
LIMK1-207ENST00000491052 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
LIMK1-207ENST00000491052 ZNF815PA8K554 130 aa7.85□□□□□ -1.15
LIMK1-207ENST00000491052 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
LIMK1-207ENST00000491052 ANKRD39Q53RE8 183 aa7.84□□□□□ -1.15
LIMK1-207ENST00000491052 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
LIMK1-207ENST00000491052 MIEN1Q9BRT3 115 aa7.84□□□□□ -1.15
LIMK1-207ENST00000491052 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
LIMK1-207ENST00000491052 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
LIMK1-207ENST00000491052 NCR3O14931 201 aa7.83□□□□□ -1.16
LIMK1-207ENST00000491052 DIRC1Q969H9 104 aa7.83□□□□□ -1.16
LIMK1-207ENST00000491052 M0R378 163 aa7.82□□□□□ -1.16
LIMK1-207ENST00000491052 BCE1O60756 84 aa7.82□□□□□ -1.16
LIMK1-207ENST00000491052 NPC2P61916 151 aa7.82□□□□□ -1.16
LIMK1-207ENST00000491052 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
LIMK1-207ENST00000491052 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
LIMK1-207ENST00000491052 LRP1Q07954 4544 aaKnown RBP7.8□□□□□ -1.16
LIMK1-207ENST00000491052 TMEM238C9JI98 176 aa7.8□□□□□ -1.16
LIMK1-207ENST00000491052 H0Y9J4 135 aa7.8□□□□□ -1.16
LIMK1-207ENST00000491052 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
LIMK1-207ENST00000491052 LOC107984156A0A0G2JMH3 177 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 ZNF861PO60384 105 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 TIMM17BO60830 172 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 RPL28P46779 137 aaKnown RBP7.79□□□□□ -1.16
LIMK1-207ENST00000491052 UBE2AP49459 152 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 ARL17AQ8IVW1 177 aa7.79□□□□□ -1.16
LIMK1-207ENST00000491052 SMIM6P0DI80 62 aa7.78□□□□□ -1.16
LIMK1-207ENST00000491052 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
LIMK1-207ENST00000491052 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
LIMK1-207ENST00000491052 LITAFQ99732 161 aa7.78□□□□□ -1.16
LIMK1-207ENST00000491052 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
LIMK1-207ENST00000491052 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
LIMK1-207ENST00000491052 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
LIMK1-207ENST00000491052 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
LIMK1-207ENST00000491052 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
LIMK1-207ENST00000491052 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
LIMK1-207ENST00000491052 TRBV10-3A0A0K0K1G6 114 aa7.76□□□□□ -1.17
LIMK1-207ENST00000491052 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
LIMK1-207ENST00000491052 S100A12P80511 92 aa7.76□□□□□ -1.17
LIMK1-207ENST00000491052 PRLHP81277 87 aa7.76□□□□□ -1.17
LIMK1-207ENST00000491052 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
LIMK1-207ENST00000491052 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
LIMK1-207ENST00000491052 PRYO14603 147 aa7.75□□□□□ -1.17
LIMK1-207ENST00000491052 NDUFC2O95298 119 aa7.75□□□□□ -1.17
LIMK1-207ENST00000491052 LINC00518Q8N0U6 118 aa7.75□□□□□ -1.17
LIMK1-207ENST00000491052 DDTP30046 118 aa7.74□□□□□ -1.17
LIMK1-207ENST00000491052 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
LIMK1-207ENST00000491052 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
LIMK1-207ENST00000491052 SPANXDQ9BXN6 97 aa7.73□□□□□ -1.17
LIMK1-207ENST00000491052 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
LIMK1-207ENST00000491052 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
LIMK1-207ENST00000491052 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
LIMK1-207ENST00000491052 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.18
LIMK1-207ENST00000491052 COPS9Q8WXC6 57 aa7.71□□□□□ -1.18
LIMK1-207ENST00000491052 IGLV6-57P01721 117 aa7.7□□□□□ -1.18
LIMK1-207ENST00000491052 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
LIMK1-207ENST00000491052 HIGD2AQ9BW72 106 aa7.7□□□□□ -1.18
LIMK1-207ENST00000491052 IFITM1P13164 125 aa7.69□□□□□ -1.18
LIMK1-207ENST00000491052 SPRR1AP35321 89 aa7.69□□□□□ -1.18
LIMK1-207ENST00000491052 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
LIMK1-207ENST00000491052 Q6ZVH6 145 aa7.69□□□□□ -1.18
LIMK1-207ENST00000491052 LINC00337Q8N6G1 96 aa7.69□□□□□ -1.18
LIMK1-207ENST00000491052 OR13C6PQ8NH95 151 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms