RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 Q8IZM0 81 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 ORAOV1Q8WV07 137 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 PLEKHB2Q96CS7 222 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 RMI2Q96E14 147 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 TOMM7Q9P0U1 55 aa3.17□□□□□ -1.9
EPCAM-206ENST00000490733 LRP1BQ9NZR2 4599 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 MYMXA0A1B0GTQ4 84 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 NDUFA1O15239 70 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 RTL8CO15255 209 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
EPCAM-206ENST00000490733 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 UNQ6190/PRO20217Q6UXQ8 127 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 LITAFQ99732 161 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 NDUFA12Q9UI09 145 aa3.16□□□□□ -1.9
EPCAM-206ENST00000490733 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 APOMO95445 188 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 C9orf116Q5BN46 136 aaPredicted RBP3.15□□□□□ -1.91
EPCAM-206ENST00000490733 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 C1orf134Q5TEV5 83 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 SLC25A34Q6PIV7 304 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 Q6ZRU5 148 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 MPLKIPQ8TAP9 179 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 MIEN1Q9BRT3 115 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 UQCR10Q9UDW1 63 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 CBY1Q9Y3M2 126 aa3.15□□□□□ -1.91
EPCAM-206ENST00000490733 DYNC1H1Q14204 4646 aaKnown RBP3.15□□□□□ -1.91
EPCAM-206ENST00000490733 A0A087WTM6 91 aa3.14□□□□□ -1.91
EPCAM-206ENST00000490733 PSCAO43653 123 aa3.14□□□□□ -1.91
EPCAM-206ENST00000490733 PRSS2P07478 247 aa3.14□□□□□ -1.91
EPCAM-206ENST00000490733 FUSP35637 526 aaKnown RBP eCLIP3.14□□□□□ -1.91
EPCAM-206ENST00000490733 C2orf48Q96LS8 159 aa3.14□□□□□ -1.91
EPCAM-206ENST00000490733 TSTD3H0UI37 97 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 SMIM13P0DJ93 91 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 DDTP30046 118 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 CXCL5P42830 114 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 CKS1BP61024 79 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 SOSTDC1Q6X4U4 206 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 Q8N814 137 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 DAND5Q8N907 189 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 CAMK2N2Q96S95 79 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 HIGD1BQ9P298 99 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
EPCAM-206ENST00000490733 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
EPCAM-206ENST00000490733 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.12□□□□□ -1.91
EPCAM-206ENST00000490733 TRBV30A0A0K0K1B3 111 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 TIMM17BO60830 172 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 PFN2P35080 140 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 HNRNPA3P51991 378 aaKnown RBP3.12□□□□□ -1.91
EPCAM-206ENST00000490733 CNBPP62633 177 aaKnown RBP3.12□□□□□ -1.91
EPCAM-206ENST00000490733 SCGB1D4Q6XE38 83 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 Q8NDZ9 215 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 CARD19Q96LW7 228 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
EPCAM-206ENST00000490733 SPANXB1Q9NS25 103 aaPredicted RBP3.12□□□□□ -1.91
EPCAM-206ENST00000490733 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 LINC00158P58513 81 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 NPC2P61916 151 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 COX17Q14061 63 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 MEIG1Q5JSS6 88 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 Q6ZRP5 223 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 MIR7-3HGQ8N6C7 128 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 SPANXCQ9NY87 97 aa3.11□□□□□ -1.91
EPCAM-206ENST00000490733 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 LOC107984156A0A0G2JMH3 177 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 TMEM238C9JI98 176 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 FXYD2P54710 66 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 HSD52Q0P140 79 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
EPCAM-206ENST00000490733 BVES-AS1Q5T3Y7 98 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 SDIM1Q6ZPB5 146 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 MUSTN1Q8IVN3 82 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 ARL17AQ8IVW1 177 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 C9orf163Q8N9P6 203 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
EPCAM-206ENST00000490733 EPPK1P58107 5090 aaKnown RBP3.1□□□□□ -1.91
EPCAM-206ENST00000490733 A0A096LNI7 61 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 PANO1I0J062 215 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 HINT1P49773 126 aaPredicted RBP3.09□□□□□ -1.91
EPCAM-206ENST00000490733 SRSF9Q13242 221 aaKnown RBP eCLIP3.09□□□□□ -1.91
EPCAM-206ENST00000490733 CIRBPQ14011 172 aaKnown RBP3.09□□□□□ -1.91
EPCAM-206ENST00000490733 VAMP3Q15836 100 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 TAL2Q16559 108 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 Q6ZVH6 145 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 CEND1Q8N111 149 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 HIST1H4GQ99525 98 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 SNHG12Q9BXW3 62 aa3.09□□□□□ -1.91
EPCAM-206ENST00000490733 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms