RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
VARS2-210ENST00000490699 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
VARS2-210ENST00000490699 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
VARS2-210ENST00000490699 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
VARS2-210ENST00000490699 SDIM1Q6ZPB5 146 aa7.05□□□□□ -1.28
VARS2-210ENST00000490699 Q6ZRP5 223 aa7.05□□□□□ -1.28
VARS2-210ENST00000490699 A0A096LNI7 61 aa7.04□□□□□ -1.28
VARS2-210ENST00000490699 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
VARS2-210ENST00000490699 DNAH2Q9P225 4427 aa7.04□□□□□ -1.28
VARS2-210ENST00000490699 IFITM1P13164 125 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 HIST1H4GQ99525 98 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 XAGE1AQ9HD64 81 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
VARS2-210ENST00000490699 DNAH17Q9UFH2 4485 aa7.02□□□□□ -1.29
VARS2-210ENST00000490699 HNRNPA3P51991 378 aaKnown RBP7.02□□□□□ -1.29
VARS2-210ENST00000490699 NKAPP1Q8N9T2 125 aa7.02□□□□□ -1.29
VARS2-210ENST00000490699 SPANXB1Q9NS25 103 aaPredicted RBP7.02□□□□□ -1.29
VARS2-210ENST00000490699 HIGD1BQ9P298 99 aa7.02□□□□□ -1.29
VARS2-210ENST00000490699 LINC00518Q8N0U6 118 aa7.01□□□□□ -1.29
VARS2-210ENST00000490699 DAND5Q8N907 189 aa7.01□□□□□ -1.29
VARS2-210ENST00000490699 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
VARS2-210ENST00000490699 CHTF8P0CG12 524 aa7□□□□□ -1.29
VARS2-210ENST00000490699 KRTAP10-1P60331 282 aa7□□□□□ -1.29
VARS2-210ENST00000490699 NPC2P61916 151 aa7□□□□□ -1.29
VARS2-210ENST00000490699 PRO1933Q9H354 126 aa7□□□□□ -1.29
VARS2-210ENST00000490699 TAL2Q16559 108 aa6.99□□□□□ -1.29
VARS2-210ENST00000490699 LBHQ53QV2 105 aaPredicted RBP6.99□□□□□ -1.29
VARS2-210ENST00000490699 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
VARS2-210ENST00000490699 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
VARS2-210ENST00000490699 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
VARS2-210ENST00000490699 LITAFQ99732 161 aa6.99□□□□□ -1.29
VARS2-210ENST00000490699 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
VARS2-210ENST00000490699 C9orf129Q5T035 196 aaKnown RBP6.98□□□□□ -1.29
VARS2-210ENST00000490699 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
VARS2-210ENST00000490699 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
VARS2-210ENST00000490699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
VARS2-210ENST00000490699 A0A087WYN8 130 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 M0QXV9 152 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 NDUFC2O95298 119 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 HSD52Q0P140 79 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 Q6ZSA8 131 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 CBY1Q9Y3M2 126 aa6.97□□□□□ -1.29
VARS2-210ENST00000490699 LOC107984156A0A0G2JMH3 177 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 UBE2BP63146 152 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 ARL17AQ8IVW1 177 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 PLAC8Q9NZF1 115 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 TP73-AS1Q9UF72 201 aa6.96□□□□□ -1.3
VARS2-210ENST00000490699 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
VARS2-210ENST00000490699 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
VARS2-210ENST00000490699 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 FAM168BA1KXE4 195 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 M0R143 59 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 M0R378 163 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 NCR3O14931 201 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
VARS2-210ENST00000490699 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
VARS2-210ENST00000490699 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 PANO1I0J062 215 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 VPREB1P12018 145 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 SOSTDC1Q6X4U4 206 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 CEND1Q8N111 149 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
VARS2-210ENST00000490699 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
VARS2-210ENST00000490699 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
VARS2-210ENST00000490699 PKD1P98161 4303 aa6.92□□□□□ -1.3
VARS2-210ENST00000490699 A4D1N5 150 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 A6NDN8 102 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 DDTP30046 118 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
VARS2-210ENST00000490699 CTAG1AP78358 180 aa6.9□□□□□ -1.3
VARS2-210ENST00000490699 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
VARS2-210ENST00000490699 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.3
VARS2-210ENST00000490699 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
VARS2-210ENST00000490699 HAMPP81172 84 aa6.89□□□□□ -1.31
VARS2-210ENST00000490699 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
VARS2-210ENST00000490699 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
VARS2-210ENST00000490699 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
VARS2-210ENST00000490699 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
VARS2-210ENST00000490699 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
VARS2-210ENST00000490699 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
VARS2-210ENST00000490699 HINT1P49773 126 aaPredicted RBP6.88□□□□□ -1.31
VARS2-210ENST00000490699 PRR3P79522 188 aaKnown RBP6.88□□□□□ -1.31
VARS2-210ENST00000490699 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
VARS2-210ENST00000490699 PRYO14603 147 aa6.87□□□□□ -1.31
VARS2-210ENST00000490699 Q1RN00 199 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms