RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 TRAV12-1A0A0B4J245 112 aa16.26■□□□□ 0.19
HOXB3-211ENST00000490677 TMEM223A0PJW6 202 aa16.26■□□□□ 0.19
HOXB3-211ENST00000490677 M0R378 163 aa16.26■□□□□ 0.19
HOXB3-211ENST00000490677 CHCHD1Q96BP2 118 aaKnown RBP16.26■□□□□ 0.19
HOXB3-211ENST00000490677 RPL24P83731 157 aaKnown RBP16.25■□□□□ 0.19
HOXB3-211ENST00000490677 FAM229BQ4G0N7 80 aa16.25■□□□□ 0.19
HOXB3-211ENST00000490677 IFI27L1Q96BM0 104 aa16.24■□□□□ 0.19
HOXB3-211ENST00000490677 FAM19A1Q7Z5A9 133 aa16.21■□□□□ 0.19
HOXB3-211ENST00000490677 LINC00158P58513 81 aa16.17■□□□□ 0.18
HOXB3-211ENST00000490677 CBLN2Q8IUK8 224 aa16.16■□□□□ 0.18
HOXB3-211ENST00000490677 FAM19A2Q8N3H0 131 aa16.16■□□□□ 0.18
HOXB3-211ENST00000490677 PLEKHB2Q96CS7 222 aa16.16■□□□□ 0.18
HOXB3-211ENST00000490677 A0A0U1RRA0 63 aa16.15■□□□□ 0.18
HOXB3-211ENST00000490677 LINC00310P59036 64 aa16.14■□□□□ 0.17
HOXB3-211ENST00000490677 SMIM13P0DJ93 91 aa16.13■□□□□ 0.17
HOXB3-211ENST00000490677 LINC00304Q8N9R0 145 aa16.12■□□□□ 0.17
HOXB3-211ENST00000490677 HSBP1O75506 76 aa16.1■□□□□ 0.17
HOXB3-211ENST00000490677 IGKV2D-26A0A0A0MRZ7 120 aa16.08■□□□□ 0.16
HOXB3-211ENST00000490677 C3orf22Q8N5N4 141 aa16.08■□□□□ 0.16
HOXB3-211ENST00000490677 MIR7-3HGQ8N6C7 128 aa16.08■□□□□ 0.16
HOXB3-211ENST00000490677 TRGC2P03986 189 aa16.07■□□□□ 0.16
HOXB3-211ENST00000490677 RETNLBQ9BQ08 111 aa16.07■□□□□ 0.16
HOXB3-211ENST00000490677 SPRR1AP35321 89 aa16.06■□□□□ 0.16
HOXB3-211ENST00000490677 TSPEAR-AS2P59090 65 aa16.06■□□□□ 0.16
HOXB3-211ENST00000490677 HERV-K104P63124 156 aa16.06■□□□□ 0.16
HOXB3-211ENST00000490677 BOD1L2Q8IYS8 172 aa16.06■□□□□ 0.16
HOXB3-211ENST00000490677 HIGD2AQ9BW72 106 aa16.06■□□□□ 0.16
HOXB3-211ENST00000490677 NDUFA12Q9UI09 145 aa16.05■□□□□ 0.16
HOXB3-211ENST00000490677 KRTAP4-16G5E9R7 235 aaPredicted RBP16.04■□□□□ 0.16
HOXB3-211ENST00000490677 MEIG1Q5JSS6 88 aa16.04■□□□□ 0.16
HOXB3-211ENST00000490677 SPRR4Q96PI1 79 aa16.04■□□□□ 0.16
HOXB3-211ENST00000490677 MUC17Q685J3 4493 aa16.04■□□□□ 0.16
HOXB3-211ENST00000490677 PRYO14603 147 aa16.03■□□□□ 0.16
HOXB3-211ENST00000490677 SERF1AO75920 110 aa16.03■□□□□ 0.16
HOXB3-211ENST00000490677 NCR3O14931 201 aa16.02■□□□□ 0.16
HOXB3-211ENST00000490677 KCNQ1DNQ9H478 68 aa16.02■□□□□ 0.16
HOXB3-211ENST00000490677 CTAG1AP78358 180 aa16.01■□□□□ 0.15
HOXB3-211ENST00000490677 H0Y8G0 127 aa16■□□□□ 0.15
HOXB3-211ENST00000490677 LEPROTL1O95214 131 aa16■□□□□ 0.15
HOXB3-211ENST00000490677 LINC00337Q8N6G1 96 aa16■□□□□ 0.15
HOXB3-211ENST00000490677 MYMXA0A1B0GTQ4 84 aa15.99■□□□□ 0.15
HOXB3-211ENST00000490677 LOC107984156A0A0G2JMH3 177 aa15.98■□□□□ 0.15
HOXB3-211ENST00000490677 ATP6V1G1O75348 118 aa15.98■□□□□ 0.15
HOXB3-211ENST00000490677 ARL17AQ8IVW1 177 aa15.98■□□□□ 0.15
HOXB3-211ENST00000490677 TRBV10-3A0A0K0K1G6 114 aa15.96■□□□□ 0.15
HOXB3-211ENST00000490677 LINC00587B1AMM8 73 aa15.96■□□□□ 0.15
HOXB3-211ENST00000490677 LEPROTO15243 131 aa15.96■□□□□ 0.15
HOXB3-211ENST00000490677 DAND5Q8N907 189 aa15.94■□□□□ 0.14
HOXB3-211ENST00000490677 PLNP26678 52 aa15.93■□□□□ 0.14
HOXB3-211ENST00000490677 SMCR5Q8TEV8 140 aa15.93■□□□□ 0.14
HOXB3-211ENST00000490677 COLCA2A8K830 154 aa15.92■□□□□ 0.14
HOXB3-211ENST00000490677 TPRXLQ17RH7 258 aa15.92■□□□□ 0.14
HOXB3-211ENST00000490677 MAP1LC3CQ9BXW4 147 aa15.92■□□□□ 0.14
HOXB3-211ENST00000490677 PMCHL2Q9BQD1 86 aa15.91■□□□□ 0.14
HOXB3-211ENST00000490677 J3QQQ9 107 aa15.9■□□□□ 0.14
HOXB3-211ENST00000490677 SLC7A5P1Q8MH63 180 aa15.9■□□□□ 0.14
HOXB3-211ENST00000490677 ZNF706Q9Y5V0 76 aaPredicted RBP15.9■□□□□ 0.14
HOXB3-211ENST00000490677 FABP4P15090 132 aa15.89■□□□□ 0.13
HOXB3-211ENST00000490677 IGLV7-46A0A075B6I9 117 aa15.88■□□□□ 0.13
HOXB3-211ENST00000490677 DPM2O94777 84 aa15.88■□□□□ 0.13
HOXB3-211ENST00000490677 HSPB8Q9UJY1 196 aa15.88■□□□□ 0.13
HOXB3-211ENST00000490677 ETDCA0A1B0GVM5 59 aa15.87■□□□□ 0.13
HOXB3-211ENST00000490677 B5MCH6 92 aa15.87■□□□□ 0.13
HOXB3-211ENST00000490677 LINC00483Q53H64 154 aa15.87■□□□□ 0.13
HOXB3-211ENST00000490677 FAT4Q6V0I7 4981 aa15.87■□□□□ 0.13
HOXB3-211ENST00000490677 TRBV10-2A0A0K0K1G8 114 aa15.86■□□□□ 0.13
HOXB3-211ENST00000490677 SPAG11AQ6PDA7 123 aa15.86■□□□□ 0.13
HOXB3-211ENST00000490677 IGKCP01834 107 aa15.85■□□□□ 0.13
HOXB3-211ENST00000490677 NMUP48645 174 aa15.84■□□□□ 0.13
HOXB3-211ENST00000490677 PPDPFQ9H3Y8 114 aa15.84■□□□□ 0.13
HOXB3-211ENST00000490677 ERC2-IT1O76042 136 aa15.83■□□□□ 0.12
HOXB3-211ENST00000490677 Q8NBF4 154 aa15.83■□□□□ 0.12
HOXB3-211ENST00000490677 EIF4EBP3O60516 100 aaPredicted RBP15.82■□□□□ 0.12
HOXB3-211ENST00000490677 DDTP30046 118 aa15.82■□□□□ 0.12
HOXB3-211ENST00000490677 Q9BRP9 147 aa15.82■□□□□ 0.12
HOXB3-211ENST00000490677 HERVK_113P61574 105 aa15.81■□□□□ 0.12
HOXB3-211ENST00000490677 SOSTDC1Q6X4U4 206 aa15.81■□□□□ 0.12
HOXB3-211ENST00000490677 CDIP1Q9H305 208 aa15.8■□□□□ 0.12
HOXB3-211ENST00000490677 SPANXB1Q9NS25 103 aaPredicted RBP15.8■□□□□ 0.12
HOXB3-211ENST00000490677 NDUFC2O95298 119 aa15.79■□□□□ 0.12
HOXB3-211ENST00000490677 IGLV6-57P01721 117 aa15.79■□□□□ 0.12
HOXB3-211ENST00000490677 LGALS3P17931 250 aaKnown RBP15.79■□□□□ 0.12
HOXB3-211ENST00000490677 ADAMTSL4-AS1Q5T5F5 129 aa15.78■□□□□ 0.12
HOXB3-211ENST00000490677 Q6ZRX8 168 aa15.77■□□□□ 0.12
HOXB3-211ENST00000490677 A0A0J9YXY3 114 aa15.76■□□□□ 0.11
HOXB3-211ENST00000490677 E9PLD3 99 aa15.75■□□□□ 0.11
HOXB3-211ENST00000490677 GAGE2AQ6NT46 116 aa15.75■□□□□ 0.11
HOXB3-211ENST00000490677 A0A0U1RQV1 116 aa15.74■□□□□ 0.11
HOXB3-211ENST00000490677 S100A12P80511 92 aa15.74■□□□□ 0.11
HOXB3-211ENST00000490677 FP248Q71RG6 208 aaPredicted RBP15.74■□□□□ 0.11
HOXB3-211ENST00000490677 LCE2AQ5TA79 106 aaPredicted RBP15.73■□□□□ 0.11
HOXB3-211ENST00000490677 MIEN1Q9BRT3 115 aa15.73■□□□□ 0.11
HOXB3-211ENST00000490677 C4orf48Q5BLP8 95 aa15.72■□□□□ 0.11
HOXB3-211ENST00000490677 HIST1H2BKO60814 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 SPINK1P00995 79 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BJP06899 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BOP23527 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BBP33778 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BDP58876 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 NPC2P61916 151 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms