RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 HERC2O95714 4834 aa6.79□□□□□ -1.32
VPS13D-210ENST00000489961 A0A0J9YXY3 114 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 UBE2BP63146 152 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 RPL24P83731 157 aaKnown RBP6.78□□□□□ -1.32
VPS13D-210ENST00000489961 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
VPS13D-210ENST00000489961 IGLV5-37A0A075B6J1 123 aa6.77□□□□□ -1.33
VPS13D-210ENST00000489961 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
VPS13D-210ENST00000489961 INAFM2P0DMQ5 153 aa6.76□□□□□ -1.33
VPS13D-210ENST00000489961 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
VPS13D-210ENST00000489961 PRR3P79522 188 aaKnown RBP6.76□□□□□ -1.33
VPS13D-210ENST00000489961 TTTY13Q9BZ97 58 aa6.76□□□□□ -1.33
VPS13D-210ENST00000489961 TIMM17BO60830 172 aa6.75□□□□□ -1.33
VPS13D-210ENST00000489961 VPREB1P12018 145 aa6.75□□□□□ -1.33
VPS13D-210ENST00000489961 DAND5Q8N907 189 aa6.75□□□□□ -1.33
VPS13D-210ENST00000489961 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
VPS13D-210ENST00000489961 PSORS1C2Q9UIG4 136 aa6.75□□□□□ -1.33
VPS13D-210ENST00000489961 SCGB1D4Q6XE38 83 aa6.74□□□□□ -1.33
VPS13D-210ENST00000489961 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
VPS13D-210ENST00000489961 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
VPS13D-210ENST00000489961 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
VPS13D-210ENST00000489961 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-210ENST00000489961 C1orf137Q5JT78 98 aa6.73□□□□□ -1.33
VPS13D-210ENST00000489961 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
VPS13D-210ENST00000489961 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
VPS13D-210ENST00000489961 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
VPS13D-210ENST00000489961 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
VPS13D-210ENST00000489961 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
VPS13D-210ENST00000489961 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
VPS13D-210ENST00000489961 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 M0R378 163 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 NPC2P61916 151 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 Q8NDZ9 215 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 LITAFQ99732 161 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 FAT1Q14517 4588 aa6.71□□□□□ -1.34
VPS13D-210ENST00000489961 NCR3O14931 201 aa6.7□□□□□ -1.34
VPS13D-210ENST00000489961 HNRNPA3P51991 378 aaKnown RBP6.7□□□□□ -1.34
VPS13D-210ENST00000489961 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 IGLV1-50A0A075B6I6 118 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 IGKV2-28A0A075B6P5 120 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 NDUFC2O95298 119 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 IGKV2D-28P01615 120 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 SPANXDQ9BXN6 97 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
VPS13D-210ENST00000489961 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
VPS13D-210ENST00000489961 TRBV10-2A0A0K0K1G8 114 aa6.68□□□□□ -1.34
VPS13D-210ENST00000489961 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
VPS13D-210ENST00000489961 Q6ZVH6 145 aa6.68□□□□□ -1.34
VPS13D-210ENST00000489961 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-210ENST00000489961 PAM16Q9Y3D7 125 aa6.68□□□□□ -1.34
VPS13D-210ENST00000489961 BCE1O60756 84 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 COX8AP10176 69 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 IFITM1P13164 125 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 S100A12P80511 92 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 SRSF9Q13242 221 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13D-210ENST00000489961 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 PYY3Q5JQD4 70 aa6.67□□□□□ -1.34
VPS13D-210ENST00000489961 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
VPS13D-210ENST00000489961 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
VPS13D-210ENST00000489961 DLEU1O43261 78 aa6.65□□□□□ -1.34
VPS13D-210ENST00000489961 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
VPS13D-210ENST00000489961 DIRC1Q969H9 104 aa6.65□□□□□ -1.34
VPS13D-210ENST00000489961 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
VPS13D-210ENST00000489961 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
VPS13D-210ENST00000489961 TRBV10-3A0A0K0K1G6 114 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 PRYO14603 147 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 ZNF861PO60384 105 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 DDTP30046 118 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
VPS13D-210ENST00000489961 UBE2AP49459 152 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 C14orf144Q96I85 54 aa6.64□□□□□ -1.35
VPS13D-210ENST00000489961 SLC25A34Q6PIV7 304 aa6.63□□□□□ -1.35
VPS13D-210ENST00000489961 FAM19A1Q7Z5A9 133 aa6.63□□□□□ -1.35
VPS13D-210ENST00000489961 MUSTN1Q8IVN3 82 aa6.63□□□□□ -1.35
VPS13D-210ENST00000489961 KCNQ1DNQ9H478 68 aa6.63□□□□□ -1.35
VPS13D-210ENST00000489961 CBY1Q9Y3M2 126 aa6.63□□□□□ -1.35
VPS13D-210ENST00000489961 H0Y9J4 135 aa6.62□□□□□ -1.35
VPS13D-210ENST00000489961 OXTP01178 125 aa6.62□□□□□ -1.35
VPS13D-210ENST00000489961 IGLV6-57P01721 117 aa6.62□□□□□ -1.35
VPS13D-210ENST00000489961 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
VPS13D-210ENST00000489961 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-210ENST00000489961 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-210ENST00000489961 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 ETDCA0A1B0GVM5 59 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 SPRR1AP35321 89 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 PRLHP81277 87 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 HIST1H4GQ99525 98 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
VPS13D-210ENST00000489961 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
VPS13D-210ENST00000489961 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms