RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 Q8IZM0 81 aa7.84□□□□□ -1.15
TRIM40-208ENST00000489892 A0A1B0GV72 72 aa7.83□□□□□ -1.16
TRIM40-208ENST00000489892 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
TRIM40-208ENST00000489892 F8WDY8 70 aa7.83□□□□□ -1.16
TRIM40-208ENST00000489892 TRACP01848 142 aa7.83□□□□□ -1.16
TRIM40-208ENST00000489892 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
TRIM40-208ENST00000489892 C6orf226Q5I0X4 101 aa7.82□□□□□ -1.16
TRIM40-208ENST00000489892 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
TRIM40-208ENST00000489892 Q9HAA7 133 aa7.82□□□□□ -1.16
TRIM40-208ENST00000489892 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
TRIM40-208ENST00000489892 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
TRIM40-208ENST00000489892 CKS1BP61024 79 aa7.81□□□□□ -1.16
TRIM40-208ENST00000489892 NPC2P61916 151 aa7.81□□□□□ -1.16
TRIM40-208ENST00000489892 TOMM7Q9P0U1 55 aa7.81□□□□□ -1.16
TRIM40-208ENST00000489892 ACYP1P07311 99 aa7.8□□□□□ -1.16
TRIM40-208ENST00000489892 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
TRIM40-208ENST00000489892 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
TRIM40-208ENST00000489892 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
TRIM40-208ENST00000489892 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
TRIM40-208ENST00000489892 Q6Q795 121 aa7.79□□□□□ -1.16
TRIM40-208ENST00000489892 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
TRIM40-208ENST00000489892 PSCAO43653 123 aa7.78□□□□□ -1.16
TRIM40-208ENST00000489892 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
TRIM40-208ENST00000489892 KRTAP26-1Q6PEX3 210 aa7.78□□□□□ -1.16
TRIM40-208ENST00000489892 DAND5Q8N907 189 aa7.78□□□□□ -1.16
TRIM40-208ENST00000489892 H0YGX0 51 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 MIR7-3HGQ8N6C7 128 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 SND1-IT1Q9HBX3 110 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
TRIM40-208ENST00000489892 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
TRIM40-208ENST00000489892 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
TRIM40-208ENST00000489892 SNCGO76070 127 aa7.76□□□□□ -1.17
TRIM40-208ENST00000489892 XGP55808 180 aa7.76□□□□□ -1.17
TRIM40-208ENST00000489892 COX17Q14061 63 aa7.76□□□□□ -1.17
TRIM40-208ENST00000489892 LINC00476Q8WZB0 136 aa7.76□□□□□ -1.17
TRIM40-208ENST00000489892 UBR4Q5T4S7 5183 aa7.76□□□□□ -1.17
TRIM40-208ENST00000489892 LY6G6CO95867 125 aa7.75□□□□□ -1.17
TRIM40-208ENST00000489892 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
TRIM40-208ENST00000489892 LINC00158P58513 81 aa7.75□□□□□ -1.17
TRIM40-208ENST00000489892 A0A1B0GX51 115 aa7.74□□□□□ -1.17
TRIM40-208ENST00000489892 KIAA0087Q14695 138 aa7.74□□□□□ -1.17
TRIM40-208ENST00000489892 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 NDUFC2O95298 119 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 CAMK2N2Q96S95 79 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 KRTAP1-5Q9BYS1 174 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
TRIM40-208ENST00000489892 DNAL4O96015 105 aa7.72□□□□□ -1.17
TRIM40-208ENST00000489892 Q6ZR54 194 aa7.71□□□□□ -1.18
TRIM40-208ENST00000489892 C6orf223Q8N319 242 aa7.71□□□□□ -1.18
TRIM40-208ENST00000489892 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 GAGE2BQ13066 116 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 GAGE2EQ4V326 116 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 HIGD2BQ4VC39 106 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 LINC00337Q8N6G1 96 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 GAGE2DQ9UEU5 116 aa7.7□□□□□ -1.18
TRIM40-208ENST00000489892 IGKV2-28A0A075B6P5 120 aa7.69□□□□□ -1.18
TRIM40-208ENST00000489892 IGKV2D-28P01615 120 aa7.69□□□□□ -1.18
TRIM40-208ENST00000489892 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
TRIM40-208ENST00000489892 BAALC-AS2P0C853 105 aa7.68□□□□□ -1.18
TRIM40-208ENST00000489892 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
TRIM40-208ENST00000489892 KMT2AQ03164 3969 aa7.68□□□□□ -1.18
TRIM40-208ENST00000489892 M0R2N4 97 aa7.67□□□□□ -1.18
TRIM40-208ENST00000489892 PFN2P35080 140 aa7.67□□□□□ -1.18
TRIM40-208ENST00000489892 SMIM11BQ8TCY0 68 aa7.67□□□□□ -1.18
TRIM40-208ENST00000489892 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
TRIM40-208ENST00000489892 CNBPP62633 177 aaKnown RBP7.66□□□□□ -1.18
TRIM40-208ENST00000489892 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
TRIM40-208ENST00000489892 NDUFC2-KCTD14E9PQ53 114 aa7.65□□□□□ -1.18
TRIM40-208ENST00000489892 H3BQ85 93 aa7.65□□□□□ -1.18
TRIM40-208ENST00000489892 Q6ZRU5 148 aa7.65□□□□□ -1.18
TRIM40-208ENST00000489892 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
TRIM40-208ENST00000489892 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
TRIM40-208ENST00000489892 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
TRIM40-208ENST00000489892 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
TRIM40-208ENST00000489892 LINC00526Q96FQ7 95 aa7.64□□□□□ -1.19
TRIM40-208ENST00000489892 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
TRIM40-208ENST00000489892 ANAPC13Q9BS18 74 aa7.64□□□□□ -1.19
TRIM40-208ENST00000489892 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
TRIM40-208ENST00000489892 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
TRIM40-208ENST00000489892 OR13C6PQ8NH95 151 aa7.63□□□□□ -1.19
TRIM40-208ENST00000489892 FAM218AQ96MZ4 157 aa7.63□□□□□ -1.19
TRIM40-208ENST00000489892 ORMDL1Q9P0S3 153 aa7.63□□□□□ -1.19
TRIM40-208ENST00000489892 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
TRIM40-208ENST00000489892 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
TRIM40-208ENST00000489892 LECT2O14960 151 aa7.62□□□□□ -1.19
TRIM40-208ENST00000489892 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
TRIM40-208ENST00000489892 A0A087WTM6 91 aa7.61□□□□□ -1.19
TRIM40-208ENST00000489892 JMJD7-PLA2G4BH0Y9G9 81 aa7.61□□□□□ -1.19
TRIM40-208ENST00000489892 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
TRIM40-208ENST00000489892 HERC1Q15751 4861 aa7.61□□□□□ -1.19
TRIM40-208ENST00000489892 GHRHP01286 108 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms