RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 Q6ZTI0 123 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 GTF2H5Q6ZYL4 71 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 C5orf56Q8N8D9 126 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 S100A13Q99584 98 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 TENM2Q9NT68 2774 aa1.63□□□□□ -2.15
DEPDC1-204ENST00000489862 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 TCRBV4S1A1TA0A5B7 111 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 NDUFA3O95167 84 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 IL5P05113 134 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 DEFA5Q01523 94 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 S100A7L2Q5SY68 101 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 LINC01545Q5VT33 79 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 ZNF818PQ6ZRF7 136 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 ATOH7Q8N100 152 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 MYOZ3Q8TDC0 251 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SFT2D1Q8WV19 159 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 FAM103A1Q9BTL3 118 aaKnown RBP1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 FXYD6Q9H0Q3 95 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SCP2D1Q9UJQ7 156 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 STAB2Q8WWQ8 2551 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SORL1Q92673 2214 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 DNAH1Q9P2D7 4330 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 IGKV2-28A0A075B6P5 120 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 A0A087WSZ3 146 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 TRAV10A0A0B4J240 114 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SNRPGP15A8MWD9 76 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 PPYP01298 95 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 IGKV2D-28P01615 120 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 BAALC-AS2P0C853 105 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 Q56UQ5 140 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SPANXN5Q5MJ07 72 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 C10orf55Q5SWW7 151 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 C9orf153Q5TBE3 101 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 ATP6V0E2Q8NHE4 81 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 SERP1Q9Y6X1 66 aa1.62□□□□□ -2.15
DEPDC1-204ENST00000489862 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 HYPMO75409 117 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 IGKCP01834 107 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 PRH1P02810 166 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 APELAP0DMC3 54 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 IFITM1P13164 125 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 BRS3P32247 399 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 WT1-ASQ06250 92 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 PDE6HQ13956 83 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 KLK9Q2XQG4 91 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 DEFB136Q30KP8 78 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 PRR9Q5T870 116 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 WFDC9Q8NEX5 89 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 ZNF431Q8TF32 576 aaPredicted RBP1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 LINC00526Q96FQ7 95 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 NAA60Q9H7X0 242 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 RPRMQ9NS64 109 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 TMEM242Q9NWH2 141 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 MRPL36Q9P0J6 103 aaKnown RBP1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 KLK9Q9UKQ9 250 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 VPS13DQ5THJ4 4388 aa1.61□□□□□ -2.15
DEPDC1-204ENST00000489862 IGLC7A0M8Q6 106 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 FXYD4P59646 89 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 CNBPP62633 177 aaKnown RBP1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 FXYD3Q14802 87 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 TMEM254Q8TBM7 123 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 TMEM167AQ8TBQ9 72 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 SMIM7Q9BQ49 75 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 KMT2AQ03164 3969 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
DEPDC1-204ENST00000489862 CRYM-AS1A6NIL9 109 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 ERC2-IT1O76042 136 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 SIX6O95475 246 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 SFT2D2O95562 160 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 ADCYAP1P18509 176 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 RBM3P98179 157 aaKnown RBP1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 Q1T7F1 81 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 Q5BKY6 102 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 Q6AWC8 147 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 CASC2Q6XLA1 102 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 C9orf62Q8N4C0 152 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 TTC9CQ8N5M4 171 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 Q8N8P6 123 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 LIMD2Q9BT23 127 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 NDUFA4L2Q9NRX3 87 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 NDUFA12Q9UI09 145 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.15
DEPDC1-204ENST00000489862 TRAV14DV4A0A0A6YYC5 116 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 PIGBOS1A0A0B4J2F0 54 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 I3L2K1 104 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 K7EIL1 84 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 K7EIM0 57 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 MT-ATP8P03928 68 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 ASB16-AS1Q495Z4 193 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 NMSQ5H8A3 153 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 CSAG1Q6PB30 78 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 UNQ5815/PRO19632Q6UWF5 114 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 NDUFA11Q86Y39 141 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 VSTM2AQ8TAG5 236 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 PPP1R1CQ8WVI7 109 aa1.58□□□□□ -2.16
DEPDC1-204ENST00000489862 NMES1Q9C002 83 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms