RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
SMARCD3-213ENST00000489503 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 C3orf79P0CE67 100 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 VPREB1P12018 145 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 HERVK_113P61574 105 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 COX17Q14061 63 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
SMARCD3-213ENST00000489503 J3QQQ9 107 aa7.47□□□□□ -1.21
SMARCD3-213ENST00000489503 KRTDAPP60985 99 aa7.47□□□□□ -1.21
SMARCD3-213ENST00000489503 LINC01545Q5VT33 79 aa7.47□□□□□ -1.21
SMARCD3-213ENST00000489503 PLEKHB2Q96CS7 222 aa7.47□□□□□ -1.21
SMARCD3-213ENST00000489503 MYMXA0A1B0GTQ4 84 aa7.46□□□□□ -1.22
SMARCD3-213ENST00000489503 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.22
SMARCD3-213ENST00000489503 TNXBP22105 4242 aa7.46□□□□□ -1.22
SMARCD3-213ENST00000489503 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 HERV-K104P63124 156 aa7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 DAND5Q8N907 189 aa7.45□□□□□ -1.22
SMARCD3-213ENST00000489503 REG3GQ6UW15 175 aa7.44□□□□□ -1.22
SMARCD3-213ENST00000489503 E9PLD3 99 aa7.43□□□□□ -1.22
SMARCD3-213ENST00000489503 H0Y9J4 135 aa7.43□□□□□ -1.22
SMARCD3-213ENST00000489503 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
SMARCD3-213ENST00000489503 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 TMEM238C9JI98 176 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 NCR3O14931 201 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 BCE1O60756 84 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 BOD1L2Q8IYS8 172 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 DIRC1Q969H9 104 aa7.42□□□□□ -1.22
SMARCD3-213ENST00000489503 NMUP48645 174 aa7.41□□□□□ -1.22
SMARCD3-213ENST00000489503 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
SMARCD3-213ENST00000489503 TTTY13Q9BZ97 58 aa7.41□□□□□ -1.22
SMARCD3-213ENST00000489503 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.22
SMARCD3-213ENST00000489503 A0A0J9YXY3 114 aa7.4□□□□□ -1.22
SMARCD3-213ENST00000489503 ZNF861PO60384 105 aa7.4□□□□□ -1.22
SMARCD3-213ENST00000489503 NPC2P61916 151 aa7.39□□□□□ -1.23
SMARCD3-213ENST00000489503 HIST1H2BLQ99880 126 aa7.39□□□□□ -1.23
SMARCD3-213ENST00000489503 C20orf202A1L168 122 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 LINC00587B1AMM8 73 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 PRLHP81277 87 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 TMEM126AQ9H061 195 aa7.38□□□□□ -1.23
SMARCD3-213ENST00000489503 M0R378 163 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 S100A2P29034 98 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 RPL28P46779 137 aaKnown RBP7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 UBE2AP49459 152 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 FAM19A1Q7Z5A9 133 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 KRTAP13-1Q8IUC0 172 aa7.37□□□□□ -1.23
SMARCD3-213ENST00000489503 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
SMARCD3-213ENST00000489503 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
SMARCD3-213ENST00000489503 S100A6P06703 90 aa7.36□□□□□ -1.23
SMARCD3-213ENST00000489503 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
SMARCD3-213ENST00000489503 LITAFQ99732 161 aa7.35□□□□□ -1.23
SMARCD3-213ENST00000489503 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
SMARCD3-213ENST00000489503 TRBV10-3A0A0K0K1G6 114 aa7.34□□□□□ -1.23
SMARCD3-213ENST00000489503 LOC107984156A0A0G2JMH3 177 aa7.32□□□□□ -1.24
SMARCD3-213ENST00000489503 PRYO14603 147 aa7.32□□□□□ -1.24
SMARCD3-213ENST00000489503 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
SMARCD3-213ENST00000489503 ARL17AQ8IVW1 177 aa7.32□□□□□ -1.24
SMARCD3-213ENST00000489503 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
SMARCD3-213ENST00000489503 HIGD2AQ9BW72 106 aa7.31□□□□□ -1.24
SMARCD3-213ENST00000489503 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
SMARCD3-213ENST00000489503 A0A087X002 238 aa7.3□□□□□ -1.24
SMARCD3-213ENST00000489503 TIMM17BO60830 172 aa7.3□□□□□ -1.24
SMARCD3-213ENST00000489503 DDTP30046 118 aa7.3□□□□□ -1.24
SMARCD3-213ENST00000489503 LINC00308Q8TCZ7 52 aa7.3□□□□□ -1.24
SMARCD3-213ENST00000489503 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
SMARCD3-213ENST00000489503 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
SMARCD3-213ENST00000489503 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
SMARCD3-213ENST00000489503 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
SMARCD3-213ENST00000489503 NDUFC2O95298 119 aa7.28□□□□□ -1.24
SMARCD3-213ENST00000489503 SPRR1AP35321 89 aa7.28□□□□□ -1.24
SMARCD3-213ENST00000489503 ETDCA0A1B0GVM5 59 aa7.27□□□□□ -1.25
SMARCD3-213ENST00000489503 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
SMARCD3-213ENST00000489503 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
SMARCD3-213ENST00000489503 SCGB1D1O95968 90 aa7.26□□□□□ -1.25
SMARCD3-213ENST00000489503 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
SMARCD3-213ENST00000489503 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
SMARCD3-213ENST00000489503 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
SMARCD3-213ENST00000489503 TRAV23DV6A0A075B6W5 121 aa7.25□□□□□ -1.25
SMARCD3-213ENST00000489503 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
SMARCD3-213ENST00000489503 AKR1D1P51857 326 aa7.25□□□□□ -1.25
SMARCD3-213ENST00000489503 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
SMARCD3-213ENST00000489503 SPANXDQ9BXN6 97 aa7.25□□□□□ -1.25
SMARCD3-213ENST00000489503 B5MCH6 92 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms