RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SEC11AP67812 179 aa7.63□□□□□ -1.19
UFD1-209ENST00000489406 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
UFD1-209ENST00000489406 S100ZQ8WXG8 99 aa7.63□□□□□ -1.19
UFD1-209ENST00000489406 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
UFD1-209ENST00000489406 D6R8Y8 96 aa7.62□□□□□ -1.19
UFD1-209ENST00000489406 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 PRYO14603 147 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 ATP5LO75964 103 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 KIAA1644Q3SXP7 199 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
UFD1-209ENST00000489406 TEX46H3BTG2 121 aa7.6□□□□□ -1.19
UFD1-209ENST00000489406 KMT2DO14686 5537 aa7.59□□□□□ -1.19
UFD1-209ENST00000489406 SPRR1AP35321 89 aa7.59□□□□□ -1.19
UFD1-209ENST00000489406 CYSLTR1Q9Y271 337 aa7.59□□□□□ -1.19
UFD1-209ENST00000489406 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
UFD1-209ENST00000489406 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
UFD1-209ENST00000489406 ERG28Q9UKR5 140 aa7.56□□□□□ -1.2
UFD1-209ENST00000489406 IGIPA6NJ69 53 aa7.55□□□□□ -1.2
UFD1-209ENST00000489406 PRSS47A8MTI9 375 aa7.55□□□□□ -1.2
UFD1-209ENST00000489406 MDN1Q9NU22 5596 aa7.54□□□□□ -1.2
UFD1-209ENST00000489406 LINC00299Q6ZSB3 139 aa7.54□□□□□ -1.2
UFD1-209ENST00000489406 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
UFD1-209ENST00000489406 B5MCH6 92 aa7.53□□□□□ -1.2
UFD1-209ENST00000489406 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
UFD1-209ENST00000489406 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
UFD1-209ENST00000489406 OSTCQ9NRP0 149 aa7.52□□□□□ -1.21
UFD1-209ENST00000489406 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.21
UFD1-209ENST00000489406 Q9BRP9 147 aa7.51□□□□□ -1.21
UFD1-209ENST00000489406 V9GYV3 84 aa7.51□□□□□ -1.21
UFD1-209ENST00000489406 TRAV9-1A0A075B6T8 112 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 PPBPP02775 128 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 CEBPGP53567 150 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 COX17Q14061 63 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 PAPPA-AS1Q5QFB9 102 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 C1orf195Q5TG92 126 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 C20orf166-AS1Q96NR2 134 aa7.5□□□□□ -1.21
UFD1-209ENST00000489406 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
UFD1-209ENST00000489406 KANTRA0A1W2PQU2 76 aa7.49□□□□□ -1.21
UFD1-209ENST00000489406 H7C2G1 150 aa7.49□□□□□ -1.21
UFD1-209ENST00000489406 TAGLN2P37802 199 aaKnown RBP7.49□□□□□ -1.21
UFD1-209ENST00000489406 ZNF345Q14585 488 aa7.49□□□□□ -1.21
UFD1-209ENST00000489406 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
UFD1-209ENST00000489406 NCR3O14931 201 aa7.48□□□□□ -1.21
UFD1-209ENST00000489406 FAM74A3Q4VXF1 159 aa7.48□□□□□ -1.21
UFD1-209ENST00000489406 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
UFD1-209ENST00000489406 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
UFD1-209ENST00000489406 TRBV20-1A0A075B6N2 111 aa7.47□□□□□ -1.21
UFD1-209ENST00000489406 HMSDA8MTL9 139 aa7.47□□□□□ -1.21
UFD1-209ENST00000489406 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
UFD1-209ENST00000489406 A0A1B0GW15 77 aa7.46□□□□□ -1.22
UFD1-209ENST00000489406 F8W036 122 aa7.46□□□□□ -1.22
UFD1-209ENST00000489406 TMEM250H0YL14 139 aa7.46□□□□□ -1.22
UFD1-209ENST00000489406 BATF3Q9NR55 127 aa7.45□□□□□ -1.22
UFD1-209ENST00000489406 ORMDL2Q53FV1 153 aa7.44□□□□□ -1.22
UFD1-209ENST00000489406 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
UFD1-209ENST00000489406 Q8N8P6 123 aa7.44□□□□□ -1.22
UFD1-209ENST00000489406 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
UFD1-209ENST00000489406 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
UFD1-209ENST00000489406 FAM236DA0A1B0GTK5 79 aa7.42□□□□□ -1.22
UFD1-209ENST00000489406 FAM236CP0DP71 79 aa7.42□□□□□ -1.22
UFD1-209ENST00000489406 Q6ZRX8 168 aa7.42□□□□□ -1.22
UFD1-209ENST00000489406 SMIM7Q9BQ49 75 aa7.42□□□□□ -1.22
UFD1-209ENST00000489406 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 SMIM27A0A1W2PRY6 76 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 KRTAP5-9P26371 169 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 LINC00158P58513 81 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
UFD1-209ENST00000489406 SMIM29Q86T20 159 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 BOD1L2Q8IYS8 172 aa7.41□□□□□ -1.22
UFD1-209ENST00000489406 H3BRM9 83 aa7.4□□□□□ -1.22
UFD1-209ENST00000489406 S100A8P05109 93 aa7.4□□□□□ -1.22
UFD1-209ENST00000489406 S100A12P80511 92 aa7.4□□□□□ -1.22
UFD1-209ENST00000489406 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
UFD1-209ENST00000489406 CD164Q04900 197 aa7.39□□□□□ -1.23
UFD1-209ENST00000489406 Q75L30 129 aa7.39□□□□□ -1.23
UFD1-209ENST00000489406 NDUFA13Q9P0J0 144 aa7.39□□□□□ -1.23
UFD1-209ENST00000489406 Q5XG85 94 aa7.38□□□□□ -1.23
UFD1-209ENST00000489406 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
UFD1-209ENST00000489406 PMVKQ15126 192 aa7.37□□□□□ -1.23
UFD1-209ENST00000489406 ADCYAP1P18509 176 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 C10orf91Q5T1B1 145 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 ERASQ7Z444 233 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 TOMM6Q96B49 74 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 CST9LQ9H4G1 147 aa7.36□□□□□ -1.23
UFD1-209ENST00000489406 Q1RN00 199 aa7.35□□□□□ -1.23
UFD1-209ENST00000489406 ALKAL2Q6UX46 152 aa7.35□□□□□ -1.23
UFD1-209ENST00000489406 LAMTOR2Q9Y2Q5 125 aa7.35□□□□□ -1.23
UFD1-209ENST00000489406 K7EMI3 77 aa7.34□□□□□ -1.23
UFD1-209ENST00000489406 OBSCN-AS1Q96MR7 158 aa7.33□□□□□ -1.24
UFD1-209ENST00000489406 G0S2P27469 103 aa7.32□□□□□ -1.24
UFD1-209ENST00000489406 JOSD1Q15040 202 aaPredicted RBP7.32□□□□□ -1.24
UFD1-209ENST00000489406 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
UFD1-209ENST00000489406 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
UFD1-209ENST00000489406 KRTAP4-12Q9BQ66 201 aa7.32□□□□□ -1.24
UFD1-209ENST00000489406 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms