RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
FDPS-214ENST00000489324 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
FDPS-214ENST00000489324 Q6ZVH6 145 aa6.22□□□□□ -1.41
FDPS-214ENST00000489324 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
FDPS-214ENST00000489324 PLAC8Q9NZF1 115 aa6.22□□□□□ -1.41
FDPS-214ENST00000489324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
FDPS-214ENST00000489324 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 A0A1B0GWB2 263 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 Q6ZRP5 223 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 NDUFA12Q9UI09 145 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
FDPS-214ENST00000489324 A0A087WYN8 130 aa6.2□□□□□ -1.42
FDPS-214ENST00000489324 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
FDPS-214ENST00000489324 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
FDPS-214ENST00000489324 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
FDPS-214ENST00000489324 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
FDPS-214ENST00000489324 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
FDPS-214ENST00000489324 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
FDPS-214ENST00000489324 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
FDPS-214ENST00000489324 A6NJY4 79 aa6.19□□□□□ -1.42
FDPS-214ENST00000489324 PANO1I0J062 215 aa6.19□□□□□ -1.42
FDPS-214ENST00000489324 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
FDPS-214ENST00000489324 NHP2Q9NX24 153 aaKnown RBP6.19□□□□□ -1.42
FDPS-214ENST00000489324 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
FDPS-214ENST00000489324 TIMM17BO60830 172 aa6.18□□□□□ -1.42
FDPS-214ENST00000489324 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
FDPS-214ENST00000489324 Q8N1X5 172 aa6.18□□□□□ -1.42
FDPS-214ENST00000489324 LITAFQ99732 161 aa6.18□□□□□ -1.42
FDPS-214ENST00000489324 HERC2O95714 4834 aa6.18□□□□□ -1.42
FDPS-214ENST00000489324 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 K7ERJ3 54 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 PFN2P35080 140 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 VAMP3Q15836 100 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 MEIG1Q5JSS6 88 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 SPANXCQ9NY87 97 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
FDPS-214ENST00000489324 H3BUT2 72 aa6.16□□□□□ -1.42
FDPS-214ENST00000489324 LINC00158P58513 81 aa6.16□□□□□ -1.42
FDPS-214ENST00000489324 C9orf129Q5T035 196 aaKnown RBP6.16□□□□□ -1.42
FDPS-214ENST00000489324 RAB37Q96AX2 223 aa6.16□□□□□ -1.42
FDPS-214ENST00000489324 HSPG2P98160 4391 aa6.15□□□□□ -1.42
FDPS-214ENST00000489324 A0A1W2PNN7 141 aa6.15□□□□□ -1.42
FDPS-214ENST00000489324 A0A1W2PPM0 123 aa6.15□□□□□ -1.42
FDPS-214ENST00000489324 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
FDPS-214ENST00000489324 RPL24P83731 157 aaKnown RBP6.15□□□□□ -1.42
FDPS-214ENST00000489324 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.42
FDPS-214ENST00000489324 K7EP34 96 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 IFITM1P13164 125 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 HAMPP81172 84 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 MUSTN1Q8IVN3 82 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 XAGE1AQ9HD64 81 aa6.14□□□□□ -1.43
FDPS-214ENST00000489324 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 LOC107984156A0A0G2JMH3 177 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 A4D1N5 150 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 GAGE10A6NGK3 116 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
FDPS-214ENST00000489324 FABP2P12104 132 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 ARL17AQ8IVW1 177 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
FDPS-214ENST00000489324 M0QXV9 152 aa6.12□□□□□ -1.43
FDPS-214ENST00000489324 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
FDPS-214ENST00000489324 CFC1P0CG37 223 aa6.12□□□□□ -1.43
FDPS-214ENST00000489324 Q5VSD8 79 aa6.12□□□□□ -1.43
FDPS-214ENST00000489324 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
FDPS-214ENST00000489324 MIR7-3HGQ8N6C7 128 aa6.12□□□□□ -1.43
FDPS-214ENST00000489324 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
FDPS-214ENST00000489324 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 FAM168BA1KXE4 195 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 RPL37AP61513 92 aaKnown RBP6.11□□□□□ -1.43
FDPS-214ENST00000489324 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 C22orf24Q9Y442 160 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
FDPS-214ENST00000489324 FAT1Q14517 4588 aa6.1□□□□□ -1.43
FDPS-214ENST00000489324 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
FDPS-214ENST00000489324 TSPAN13O95857 204 aa6.1□□□□□ -1.43
FDPS-214ENST00000489324 SERTAD4-AS1Q5TG53 156 aa6.1□□□□□ -1.43
FDPS-214ENST00000489324 PHF5AQ7RTV0 110 aaKnown RBP6.1□□□□□ -1.43
FDPS-214ENST00000489324 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
FDPS-214ENST00000489324 VPREB1P12018 145 aa6.09□□□□□ -1.43
FDPS-214ENST00000489324 UBE2BP63146 152 aa6.09□□□□□ -1.43
FDPS-214ENST00000489324 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
FDPS-214ENST00000489324 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
FDPS-214ENST00000489324 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
FDPS-214ENST00000489324 NDUFC2O95298 119 aa6.08□□□□□ -1.44
FDPS-214ENST00000489324 TRBV10-2A0A0K0K1G8 114 aa6.07□□□□□ -1.44
FDPS-214ENST00000489324 M0R378 163 aa6.07□□□□□ -1.44
FDPS-214ENST00000489324 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
FDPS-214ENST00000489324 DAND5Q8N907 189 aa6.07□□□□□ -1.44
FDPS-214ENST00000489324 NPC2P61916 151 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms