RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SPINK6Q6UWN8 80 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 C2orf82Q6UX34 121 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 BAGE3Q86Y29 109 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 IFI27L1Q96BM0 104 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 DNAH8Q96JB1 4490 aa3.18□□□□□ -1.9
SF3A3-207ENST00000488934 DMBT1Q9UGM3 2413 aaPredicted RBP3.17□□□□□ -1.9
SF3A3-207ENST00000488934 M0QXV9 152 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 TRGC2P03986 189 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 SPINK8P0C7L1 97 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 UBE2BP63146 152 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 COX17Q14061 63 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 PMCHL1Q16048 86 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 LBHQ53QV2 105 aaPredicted RBP3.17□□□□□ -1.9
SF3A3-207ENST00000488934 FAM19A5Q7Z5A7 132 aaPredicted RBP3.17□□□□□ -1.9
SF3A3-207ENST00000488934 SLC7A5P1Q8MH63 180 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 HSPB8Q9UJY1 196 aa3.17□□□□□ -1.9
SF3A3-207ENST00000488934 CHTOPQ9Y3Y2 248 aaKnown RBP3.17□□□□□ -1.9
SF3A3-207ENST00000488934 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
SF3A3-207ENST00000488934 LINC00587B1AMM8 73 aa3.16□□□□□ -1.9
SF3A3-207ENST00000488934 LEPROTL1O95214 131 aa3.16□□□□□ -1.9
SF3A3-207ENST00000488934 ZNF22P17026 224 aaPredicted RBP3.16□□□□□ -1.9
SF3A3-207ENST00000488934 LITAFQ99732 161 aa3.16□□□□□ -1.9
SF3A3-207ENST00000488934 TP73-AS1Q9UF72 201 aa3.16□□□□□ -1.9
SF3A3-207ENST00000488934 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.9
SF3A3-207ENST00000488934 C11orf86A6NJI1 115 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 NUPR1O60356 82 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 PLNP26678 52 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 HNRNPA3P51991 378 aaKnown RBP3.15□□□□□ -1.91
SF3A3-207ENST00000488934 C1orf137Q5JT78 98 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
SF3A3-207ENST00000488934 PHF5AQ7RTV0 110 aaKnown RBP3.15□□□□□ -1.91
SF3A3-207ENST00000488934 PSORS1C2Q9UIG4 136 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 FAT1Q14517 4588 aa3.15□□□□□ -1.91
SF3A3-207ENST00000488934 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 COLCA2A8K830 154 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 ATP6V1G1O75348 118 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 SERF1AO75920 110 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 HERVK_113P61574 105 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 HERV-K104P63124 156 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 MRPL55Q7Z7F7 128 aaKnown RBP3.14□□□□□ -1.91
SF3A3-207ENST00000488934 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 NKAPP1Q8N9T2 125 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 DIRC1Q969H9 104 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 MAP1LC3CQ9BXW4 147 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 XAGE1AQ9HD64 81 aa3.14□□□□□ -1.91
SF3A3-207ENST00000488934 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 TMEM223A0PJW6 202 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 H0Y8G0 127 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 PFN2P35080 140 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
SF3A3-207ENST00000488934 MEIG1Q5JSS6 88 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 LINC01600Q96MT4 127 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 C22orf24Q9Y442 160 aa3.13□□□□□ -1.91
SF3A3-207ENST00000488934 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 H0Y9J4 135 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 DPM2O94777 84 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 IGKCP01834 107 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 FABP4P15090 132 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
SF3A3-207ENST00000488934 NMUP48645 174 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 AKR1D1P51857 326 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 LINC00158P58513 81 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
SF3A3-207ENST00000488934 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
SF3A3-207ENST00000488934 ZNF861PO60384 105 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 BCE1O60756 84 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 RPL13AP40429 203 aaKnown RBP3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 S100A12P80511 92 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
SF3A3-207ENST00000488934 Q75L30 129 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 MIEN1Q9BRT3 115 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
SF3A3-207ENST00000488934 PKHD1L1Q86WI1 4243 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 C20orf202A1L168 122 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 LEPROTO15243 131 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 LGALS3P17931 250 aaKnown RBP3.1□□□□□ -1.91
SF3A3-207ENST00000488934 S100A1P23297 94 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 UBE2AP49459 152 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 NDUFA12Q9UI09 145 aa3.1□□□□□ -1.91
SF3A3-207ENST00000488934 IGKV2-28A0A075B6P5 120 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 RPL37AP8A6NKH3 93 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 J3QQQ9 107 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms