RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NDUFA12Q9UI09 145 aa7.95□□□□□ -1.14
PHF1-210ENST00000488767 LEPROTO15243 131 aa7.94□□□□□ -1.14
PHF1-210ENST00000488767 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
PHF1-210ENST00000488767 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
PHF1-210ENST00000488767 DIRC1Q969H9 104 aa7.94□□□□□ -1.14
PHF1-210ENST00000488767 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
PHF1-210ENST00000488767 NMUP48645 174 aa7.93□□□□□ -1.14
PHF1-210ENST00000488767 SRSF9Q13242 221 aaKnown RBP eCLIP7.93□□□□□ -1.14
PHF1-210ENST00000488767 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
PHF1-210ENST00000488767 HERC1Q15751 4861 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 IGLV5-37A0A075B6J1 123 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 C20orf202A1L168 122 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 GAGE10A6NGK3 116 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 J3QQQ9 107 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 AKR1D1P51857 326 aa7.92□□□□□ -1.14
PHF1-210ENST00000488767 KRTDAPP60985 99 aa7.91□□□□□ -1.14
PHF1-210ENST00000488767 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
PHF1-210ENST00000488767 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.14
PHF1-210ENST00000488767 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
PHF1-210ENST00000488767 SMIM13P0DJ93 91 aa7.9□□□□□ -1.14
PHF1-210ENST00000488767 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.15
PHF1-210ENST00000488767 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
PHF1-210ENST00000488767 E9PLD3 99 aa7.89□□□□□ -1.15
PHF1-210ENST00000488767 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
PHF1-210ENST00000488767 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
PHF1-210ENST00000488767 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
PHF1-210ENST00000488767 MIEN1Q9BRT3 115 aa7.89□□□□□ -1.15
PHF1-210ENST00000488767 H0Y9J4 135 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 BCE1O60756 84 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 S100A6P06703 90 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 VPREB1P12018 145 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 S100A2P29034 98 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
PHF1-210ENST00000488767 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
PHF1-210ENST00000488767 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
PHF1-210ENST00000488767 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
PHF1-210ENST00000488767 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
PHF1-210ENST00000488767 ZNF861PO60384 105 aa7.86□□□□□ -1.15
PHF1-210ENST00000488767 UBE2AP49459 152 aa7.86□□□□□ -1.15
PHF1-210ENST00000488767 S100A12P80511 92 aa7.86□□□□□ -1.15
PHF1-210ENST00000488767 HIST3H2BBQ8N257 126 aa7.86□□□□□ -1.15
PHF1-210ENST00000488767 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
PHF1-210ENST00000488767 M0R378 163 aa7.85□□□□□ -1.15
PHF1-210ENST00000488767 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
PHF1-210ENST00000488767 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
PHF1-210ENST00000488767 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
PHF1-210ENST00000488767 HIST1H2BLQ99880 126 aa7.84□□□□□ -1.15
PHF1-210ENST00000488767 SNRPEP62304 92 aaKnown RBP7.83□□□□□ -1.16
PHF1-210ENST00000488767 MT1HL1P0DM35 61 aa7.82□□□□□ -1.16
PHF1-210ENST00000488767 DAND5Q8N907 189 aa7.82□□□□□ -1.16
PHF1-210ENST00000488767 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
PHF1-210ENST00000488767 ZNF815PA8K554 130 aa7.81□□□□□ -1.16
PHF1-210ENST00000488767 NCR3O14931 201 aa7.81□□□□□ -1.16
PHF1-210ENST00000488767 FAM19A1Q7Z5A9 133 aa7.81□□□□□ -1.16
PHF1-210ENST00000488767 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
PHF1-210ENST00000488767 C5orf52A6NGY3 159 aa7.8□□□□□ -1.16
PHF1-210ENST00000488767 TIMM17BO60830 172 aa7.8□□□□□ -1.16
PHF1-210ENST00000488767 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
PHF1-210ENST00000488767 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
PHF1-210ENST00000488767 Q8NDZ9 215 aa7.79□□□□□ -1.16
PHF1-210ENST00000488767 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
PHF1-210ENST00000488767 TRBV10-2A0A0K0K1G8 114 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 HSBP1L1C9JCN9 74 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 PRYO14603 147 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 NDUFC2O95298 119 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
PHF1-210ENST00000488767 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
PHF1-210ENST00000488767 ATOH7Q8N100 152 aa7.77□□□□□ -1.17
PHF1-210ENST00000488767 CBY1Q9Y3M2 126 aa7.77□□□□□ -1.17
PHF1-210ENST00000488767 ETDCA0A1B0GVM5 59 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 DDTP30046 118 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 NPC2P61916 151 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 PRLHP81277 87 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
PHF1-210ENST00000488767 TRBV10-3A0A0K0K1G6 114 aa7.75□□□□□ -1.17
PHF1-210ENST00000488767 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
PHF1-210ENST00000488767 LITAFQ99732 161 aa7.75□□□□□ -1.17
PHF1-210ENST00000488767 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
PHF1-210ENST00000488767 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
PHF1-210ENST00000488767 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
PHF1-210ENST00000488767 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
PHF1-210ENST00000488767 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
PHF1-210ENST00000488767 SPANXCQ9NY87 97 aa7.74□□□□□ -1.17
PHF1-210ENST00000488767 CRYGAP11844 174 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 Q6ZVH6 145 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 LINC00308Q8TCZ7 52 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
PHF1-210ENST00000488767 TNXBP22105 4242 aa7.72□□□□□ -1.17
PHF1-210ENST00000488767 SPRR1AP35321 89 aa7.72□□□□□ -1.17
PHF1-210ENST00000488767 ZNF706Q9Y5V0 76 aaPredicted RBP7.72□□□□□ -1.17
PHF1-210ENST00000488767 SCGB1D1O95968 90 aa7.71□□□□□ -1.18
PHF1-210ENST00000488767 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
PHF1-210ENST00000488767 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
PHF1-210ENST00000488767 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms