RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PRR3P79522 188 aaKnown RBP10.61□□□□□ -0.71
SHROOM1-205ENST00000488072 DAND5Q8N907 189 aa10.61□□□□□ -0.71
SHROOM1-205ENST00000488072 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
SHROOM1-205ENST00000488072 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
SHROOM1-205ENST00000488072 PSORS1C2Q9UIG4 136 aa10.6□□□□□ -0.71
SHROOM1-205ENST00000488072 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
SHROOM1-205ENST00000488072 GAGE10A6NGK3 116 aa10.59□□□□□ -0.71
SHROOM1-205ENST00000488072 MIR7-3HGQ8N6C7 128 aa10.58□□□□□ -0.72
SHROOM1-205ENST00000488072 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
SHROOM1-205ENST00000488072 LRP1Q07954 4544 aaKnown RBP10.56□□□□□ -0.72
SHROOM1-205ENST00000488072 HERV-K104P63124 156 aa10.56□□□□□ -0.72
SHROOM1-205ENST00000488072 COX17Q14061 63 aa10.56□□□□□ -0.72
SHROOM1-205ENST00000488072 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
SHROOM1-205ENST00000488072 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 C20orf202A1L168 122 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 VPREB1P12018 145 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 UBE2BP63146 152 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 LINC00167Q96N53 147 aa10.55□□□□□ -0.72
SHROOM1-205ENST00000488072 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
SHROOM1-205ENST00000488072 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
SHROOM1-205ENST00000488072 PLA2G2DQ9UNK4 145 aa10.54□□□□□ -0.72
SHROOM1-205ENST00000488072 NPC2P61916 151 aa10.53□□□□□ -0.72
SHROOM1-205ENST00000488072 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
SHROOM1-205ENST00000488072 PCP2Q8IVA1 136 aa10.53□□□□□ -0.72
SHROOM1-205ENST00000488072 IGLV5-37A0A075B6J1 123 aa10.52□□□□□ -0.73
SHROOM1-205ENST00000488072 NMUP48645 174 aa10.52□□□□□ -0.73
SHROOM1-205ENST00000488072 SOSTDC1Q6X4U4 206 aa10.52□□□□□ -0.73
SHROOM1-205ENST00000488072 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
SHROOM1-205ENST00000488072 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
SHROOM1-205ENST00000488072 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
SHROOM1-205ENST00000488072 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
SHROOM1-205ENST00000488072 LITAFQ99732 161 aa10.5□□□□□ -0.73
SHROOM1-205ENST00000488072 IGKV2-28A0A075B6P5 120 aa10.49□□□□□ -0.73
SHROOM1-205ENST00000488072 IGKV2D-28P01615 120 aa10.49□□□□□ -0.73
SHROOM1-205ENST00000488072 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
SHROOM1-205ENST00000488072 NKAPP1Q8N9T2 125 aa10.49□□□□□ -0.73
SHROOM1-205ENST00000488072 NCR3O14931 201 aa10.48□□□□□ -0.73
SHROOM1-205ENST00000488072 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
SHROOM1-205ENST00000488072 TMEM238C9JI98 176 aa10.46□□□□□ -0.73
SHROOM1-205ENST00000488072 IGLV7-43P04211 117 aa10.46□□□□□ -0.73
SHROOM1-205ENST00000488072 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
SHROOM1-205ENST00000488072 LINC00587B1AMM8 73 aa10.44□□□□□ -0.74
SHROOM1-205ENST00000488072 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
SHROOM1-205ENST00000488072 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
SHROOM1-205ENST00000488072 M0R378 163 aa10.41□□□□□ -0.74
SHROOM1-205ENST00000488072 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
SHROOM1-205ENST00000488072 LINC00308Q8TCZ7 52 aa10.41□□□□□ -0.74
SHROOM1-205ENST00000488072 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
SHROOM1-205ENST00000488072 TRBV10-3A0A0K0K1G6 114 aa10.39□□□□□ -0.75
SHROOM1-205ENST00000488072 TIMM17BO60830 172 aa10.39□□□□□ -0.75
SHROOM1-205ENST00000488072 AKR1D1P51857 326 aa10.39□□□□□ -0.75
SHROOM1-205ENST00000488072 SCGB1D4Q6XE38 83 aa10.39□□□□□ -0.75
SHROOM1-205ENST00000488072 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
SHROOM1-205ENST00000488072 BCE1O60756 84 aa10.38□□□□□ -0.75
SHROOM1-205ENST00000488072 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
SHROOM1-205ENST00000488072 TMEM126AQ9H061 195 aa10.38□□□□□ -0.75
SHROOM1-205ENST00000488072 HSBP1L1C9JCN9 74 aa10.37□□□□□ -0.75
SHROOM1-205ENST00000488072 PRLHP81277 87 aa10.37□□□□□ -0.75
SHROOM1-205ENST00000488072 TNXBP22105 4242 aa10.36□□□□□ -0.75
SHROOM1-205ENST00000488072 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
SHROOM1-205ENST00000488072 PYY3Q5JQD4 70 aa10.36□□□□□ -0.75
SHROOM1-205ENST00000488072 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
SHROOM1-205ENST00000488072 PAM16Q9Y3D7 125 aa10.36□□□□□ -0.75
SHROOM1-205ENST00000488072 ZNF861PO60384 105 aa10.35□□□□□ -0.75
SHROOM1-205ENST00000488072 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
SHROOM1-205ENST00000488072 KRTAP13-1Q8IUC0 172 aa10.35□□□□□ -0.75
SHROOM1-205ENST00000488072 J3QL48 77 aa10.34□□□□□ -0.75
SHROOM1-205ENST00000488072 MUSTN1Q8IVN3 82 aa10.34□□□□□ -0.75
SHROOM1-205ENST00000488072 C14orf144Q96I85 54 aa10.34□□□□□ -0.75
SHROOM1-205ENST00000488072 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
SHROOM1-205ENST00000488072 SPANXCQ9NY87 97 aa10.34□□□□□ -0.75
SHROOM1-205ENST00000488072 H0Y9J4 135 aa10.33□□□□□ -0.76
SHROOM1-205ENST00000488072 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
SHROOM1-205ENST00000488072 FAM19A1Q7Z5A9 133 aa10.33□□□□□ -0.76
SHROOM1-205ENST00000488072 NDUFC2O95298 119 aa10.32□□□□□ -0.76
SHROOM1-205ENST00000488072 OXTP01178 125 aa10.32□□□□□ -0.76
SHROOM1-205ENST00000488072 DDTP30046 118 aa10.32□□□□□ -0.76
SHROOM1-205ENST00000488072 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
SHROOM1-205ENST00000488072 UBE2AP49459 152 aa10.31□□□□□ -0.76
SHROOM1-205ENST00000488072 DIRC1Q969H9 104 aa10.31□□□□□ -0.76
SHROOM1-205ENST00000488072 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 KRTAP1-4P0C5Y4 121 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 COX8AP10176 69 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 ANAPC11Q9NYG5 84 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 HERC1Q15751 4861 aa10.3□□□□□ -0.76
SHROOM1-205ENST00000488072 IGLV6-57P01721 117 aa10.29□□□□□ -0.76
SHROOM1-205ENST00000488072 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
SHROOM1-205ENST00000488072 VAMP8Q9BV40 100 aa10.29□□□□□ -0.76
SHROOM1-205ENST00000488072 DMBT1Q9UGM3 2413 aaPredicted RBP10.29□□□□□ -0.76
SHROOM1-205ENST00000488072 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
SHROOM1-205ENST00000488072 PRYO14603 147 aa10.28□□□□□ -0.76
SHROOM1-205ENST00000488072 SPRR1AP35321 89 aa10.28□□□□□ -0.76
SHROOM1-205ENST00000488072 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
SHROOM1-205ENST00000488072 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms