RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 AKR1D1P51857 326 aa5.78□□□□□ -1.48
LCN2-205ENST00000487719 SERTAD4-AS1Q5TG53 156 aa5.78□□□□□ -1.48
LCN2-205ENST00000487719 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
LCN2-205ENST00000487719 SYS1-DBNDD2H3BUS1 97 aa5.77□□□□□ -1.49
LCN2-205ENST00000487719 J3QQQ9 107 aa5.77□□□□□ -1.49
LCN2-205ENST00000487719 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
LCN2-205ENST00000487719 PMCHL2Q9BQD1 86 aa5.77□□□□□ -1.49
LCN2-205ENST00000487719 MIEN1Q9BRT3 115 aa5.77□□□□□ -1.49
LCN2-205ENST00000487719 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
LCN2-205ENST00000487719 S100A12P80511 92 aa5.76□□□□□ -1.49
LCN2-205ENST00000487719 COA6Q5JTJ3 125 aaKnown RBP5.76□□□□□ -1.49
LCN2-205ENST00000487719 A0A0U1RRA0 63 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 GAGE10A6NGK3 116 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 S100A6P06703 90 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 SMIM13P0DJ93 91 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 RPL28P46779 137 aaKnown RBP5.75□□□□□ -1.49
LCN2-205ENST00000487719 KRTDAPP60985 99 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 KRTAP7-1Q8IUC3 87 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 LINC00167Q96N53 147 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
LCN2-205ENST00000487719 RPL37AP8A6NKH3 93 aa5.74□□□□□ -1.49
LCN2-205ENST00000487719 H0Y9J4 135 aa5.74□□□□□ -1.49
LCN2-205ENST00000487719 S100A2P29034 98 aa5.74□□□□□ -1.49
LCN2-205ENST00000487719 UBE2AP49459 152 aa5.74□□□□□ -1.49
LCN2-205ENST00000487719 SRSF9Q13242 221 aaKnown RBP eCLIP5.74□□□□□ -1.49
LCN2-205ENST00000487719 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
LCN2-205ENST00000487719 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 E9PLD3 99 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 BCE1O60756 84 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 LINC01545Q5VT33 79 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 BOD1L2Q8IYS8 172 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
LCN2-205ENST00000487719 IGKV2D-26A0A0A0MRZ7 120 aa5.72□□□□□ -1.49
LCN2-205ENST00000487719 ZNF861PO60384 105 aa5.72□□□□□ -1.49
LCN2-205ENST00000487719 C3orf79P0CE67 100 aa5.72□□□□□ -1.49
LCN2-205ENST00000487719 VPREB1P12018 145 aa5.72□□□□□ -1.49
LCN2-205ENST00000487719 M0R378 163 aa5.71□□□□□ -1.5
LCN2-205ENST00000487719 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.5
LCN2-205ENST00000487719 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
LCN2-205ENST00000487719 IGLV1-50A0A075B6I6 118 aa5.7□□□□□ -1.5
LCN2-205ENST00000487719 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
LCN2-205ENST00000487719 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
LCN2-205ENST00000487719 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 HSBP1L1C9JCN9 74 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 NCR3O14931 201 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 COPS9Q8WXC6 57 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 CBY1Q9Y3M2 126 aa5.69□□□□□ -1.5
LCN2-205ENST00000487719 HERC1Q15751 4861 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 A0A0J9YXY3 114 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 PRYO14603 147 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
LCN2-205ENST00000487719 SCGB1D4Q6XE38 83 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 DAND5Q8N907 189 aa5.68□□□□□ -1.5
LCN2-205ENST00000487719 SPANXB1Q9NS25 103 aaPredicted RBP5.68□□□□□ -1.5
LCN2-205ENST00000487719 TIMM17BO60830 172 aa5.67□□□□□ -1.5
LCN2-205ENST00000487719 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
LCN2-205ENST00000487719 S100A7L2Q5SY68 101 aa5.67□□□□□ -1.5
LCN2-205ENST00000487719 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 NDUFC2O95298 119 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
LCN2-205ENST00000487719 DDTP30046 118 aa5.65□□□□□ -1.5
LCN2-205ENST00000487719 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
LCN2-205ENST00000487719 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
LCN2-205ENST00000487719 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 CRYGAP11844 174 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 HINT1P49773 126 aaPredicted RBP5.64□□□□□ -1.51
LCN2-205ENST00000487719 NPC2P61916 151 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 PRLHP81277 87 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 ATOH7Q8N100 152 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 HIST1H2BLQ99880 126 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
LCN2-205ENST00000487719 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
LCN2-205ENST00000487719 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
LCN2-205ENST00000487719 Q8NDZ9 215 aa5.63□□□□□ -1.51
LCN2-205ENST00000487719 SPANXCQ9NY87 97 aa5.63□□□□□ -1.51
LCN2-205ENST00000487719 SCGB1D1O95968 90 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 JOSD1Q15040 202 aaPredicted RBP5.62□□□□□ -1.51
LCN2-205ENST00000487719 Q6ZVH6 145 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 LINC00518Q8N0U6 118 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 OR13C6PQ8NH95 151 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 LINC00308Q8TCZ7 52 aa5.62□□□□□ -1.51
LCN2-205ENST00000487719 TRAV23DV6A0A075B6W5 121 aa5.61□□□□□ -1.51
LCN2-205ENST00000487719 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
LCN2-205ENST00000487719 FAM229BQ4G0N7 80 aa5.61□□□□□ -1.51
LCN2-205ENST00000487719 ANKRD39Q53RE8 183 aa5.61□□□□□ -1.51
LCN2-205ENST00000487719 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
LCN2-205ENST00000487719 IFITM1P13164 125 aa5.6□□□□□ -1.51
LCN2-205ENST00000487719 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
LCN2-205ENST00000487719 SPANXDQ9BXN6 97 aa5.6□□□□□ -1.51
LCN2-205ENST00000487719 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms