RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TRIAP1O43715 76 aa4.38□□□□□ -1.71
UBE4B-209ENST00000487244 HSBP1O75506 76 aa4.38□□□□□ -1.71
UBE4B-209ENST00000487244 C1orf137Q5JT78 98 aa4.38□□□□□ -1.71
UBE4B-209ENST00000487244 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
UBE4B-209ENST00000487244 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
UBE4B-209ENST00000487244 H0Y8G0 127 aa4.37□□□□□ -1.71
UBE4B-209ENST00000487244 SPINK6Q6UWN8 80 aa4.37□□□□□ -1.71
UBE4B-209ENST00000487244 ZNF625Q96I27 306 aaPredicted RBP4.37□□□□□ -1.71
UBE4B-209ENST00000487244 TRAV12-1A0A0B4J245 112 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 PFN2P35080 140 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 UBE2BP63146 152 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 C22orf24Q9Y442 160 aa4.36□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BKO60814 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BJP06899 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 FABP4P15090 132 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BOP23527 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BBP33778 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BDP58876 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BCP62807 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST2H2BEQ16778 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.35□□□□□ -1.71
UBE4B-209ENST00000487244 Q8NDZ9 215 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BHQ93079 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BNQ99877 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 HIST1H2BMQ99879 126 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 ERG28Q9UKR5 140 aa4.35□□□□□ -1.71
UBE4B-209ENST00000487244 GAGE10A6NGK3 116 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 LEPROTL1O95214 131 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 TSPEAR-AS2P59090 65 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
UBE4B-209ENST00000487244 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 SND1-IT1Q9HBX3 110 aa4.34□□□□□ -1.71
UBE4B-209ENST00000487244 REG3GQ6UW15 175 aa4.33□□□□□ -1.72
UBE4B-209ENST00000487244 LINC00167Q96N53 147 aa4.33□□□□□ -1.72
UBE4B-209ENST00000487244 TP73-AS1Q9UF72 201 aa4.33□□□□□ -1.72
UBE4B-209ENST00000487244 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 TNXBP22105 4242 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 A0A0U1RRA0 63 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 H0Y9J4 135 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 VPREB1P12018 145 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 DIRC1Q969H9 104 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
UBE4B-209ENST00000487244 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 PLNP26678 52 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 LINC00158P58513 81 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 COX17Q14061 63 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
UBE4B-209ENST00000487244 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
UBE4B-209ENST00000487244 BCE1O60756 84 aa4.3□□□□□ -1.72
UBE4B-209ENST00000487244 DPM2O94777 84 aa4.3□□□□□ -1.72
UBE4B-209ENST00000487244 SFTA2Q6UW10 78 aa4.3□□□□□ -1.72
UBE4B-209ENST00000487244 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
UBE4B-209ENST00000487244 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
UBE4B-209ENST00000487244 TMEM238C9JI98 176 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 LEPROTO15243 131 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 ZNF861PO60384 105 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 IGKCP01834 107 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 DAND5Q8N907 189 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
UBE4B-209ENST00000487244 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 SYS1-DBNDD2H3BUS1 97 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 J3QQQ9 107 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 KRTAP13-1Q8IUC0 172 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
UBE4B-209ENST00000487244 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 M0R378 163 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 NCR3O14931 201 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 HERV-K104P63124 156 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 PRLHP81277 87 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
UBE4B-209ENST00000487244 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
UBE4B-209ENST00000487244 LINC01545Q5VT33 79 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 TMEM126AQ9H061 195 aa4.27□□□□□ -1.73
UBE4B-209ENST00000487244 ATP6V1G1O75348 118 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 C3orf79P0CE67 100 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 LGALS3P17931 250 aaKnown RBP4.26□□□□□ -1.73
UBE4B-209ENST00000487244 RPL28P46779 137 aaKnown RBP4.26□□□□□ -1.73
UBE4B-209ENST00000487244 UBE2AP49459 152 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 HERVK_113P61574 105 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
UBE4B-209ENST00000487244 A0A087X002 238 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 E9PLD3 99 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 KRTDAPP60985 99 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
UBE4B-209ENST00000487244 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms