RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 Q5VSD8 79 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 PHF5AQ7RTV0 110 aaKnown RBP12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 PCP2Q8IVA1 136 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 C22orf24Q9Y442 160 aa12.1□□□□□ -0.47
PCOLCE-208ENST00000487172 M0QXV9 152 aa12.09□□□□□ -0.47
PCOLCE-208ENST00000487172 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
PCOLCE-208ENST00000487172 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
PCOLCE-208ENST00000487172 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
PCOLCE-208ENST00000487172 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
PCOLCE-208ENST00000487172 ADAMTSL4-AS1Q5T5F5 129 aa12.07□□□□□ -0.48
PCOLCE-208ENST00000487172 LITAFQ99732 161 aa12.07□□□□□ -0.48
PCOLCE-208ENST00000487172 VPREB1P12018 145 aa12.06□□□□□ -0.48
PCOLCE-208ENST00000487172 DAND5Q8N907 189 aa12.06□□□□□ -0.48
PCOLCE-208ENST00000487172 HERC2O95714 4834 aa12.05□□□□□ -0.48
PCOLCE-208ENST00000487172 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
PCOLCE-208ENST00000487172 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
PCOLCE-208ENST00000487172 MRPL55Q7Z7F7 128 aaKnown RBP12.05□□□□□ -0.48
PCOLCE-208ENST00000487172 KRTAP10-4P60372 401 aaPredicted RBP12.04□□□□□ -0.48
PCOLCE-208ENST00000487172 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
PCOLCE-208ENST00000487172 BOD1L2Q8IYS8 172 aa12.03□□□□□ -0.48
PCOLCE-208ENST00000487172 Q8NDZ9 215 aa12.03□□□□□ -0.48
PCOLCE-208ENST00000487172 VAMP8Q9BV40 100 aa12.03□□□□□ -0.48
PCOLCE-208ENST00000487172 FAT1Q14517 4588 aa12.02□□□□□ -0.48
PCOLCE-208ENST00000487172 TMEM238C9JI98 176 aa12.02□□□□□ -0.49
PCOLCE-208ENST00000487172 LINC00167Q96N53 147 aa12.02□□□□□ -0.49
PCOLCE-208ENST00000487172 MIEN1Q9BRT3 115 aa12.02□□□□□ -0.49
PCOLCE-208ENST00000487172 KRTAP4-5Q9BYR2 181 aa12.02□□□□□ -0.49
PCOLCE-208ENST00000487172 COX8AP10176 69 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 UBE2BP63146 152 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 SPATA45Q537H7 98 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 SPANXDQ9BXN6 97 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 PAM16Q9Y3D7 125 aa12.01□□□□□ -0.49
PCOLCE-208ENST00000487172 DLEU1O43261 78 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 SOSTDC1Q6X4U4 206 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 Q6ZVH6 145 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 PSORS1C2Q9UIG4 136 aa12□□□□□ -0.49
PCOLCE-208ENST00000487172 NDUFC2O95298 119 aa11.99□□□□□ -0.49
PCOLCE-208ENST00000487172 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
PCOLCE-208ENST00000487172 M0R378 163 aa11.98□□□□□ -0.49
PCOLCE-208ENST00000487172 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
PCOLCE-208ENST00000487172 EIF4EBP3O60516 100 aaPredicted RBP11.97□□□□□ -0.49
PCOLCE-208ENST00000487172 IFITM1P13164 125 aa11.96□□□□□ -0.49
PCOLCE-208ENST00000487172 NPC2P61916 151 aa11.96□□□□□ -0.49
PCOLCE-208ENST00000487172 COPS9Q8WXC6 57 aa11.96□□□□□ -0.49
PCOLCE-208ENST00000487172 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.49
PCOLCE-208ENST00000487172 IGLV1-50A0A075B6I6 118 aa11.95□□□□□ -0.5
PCOLCE-208ENST00000487172 TRBV10-2A0A0K0K1G8 114 aa11.95□□□□□ -0.5
PCOLCE-208ENST00000487172 GAGE10A6NGK3 116 aa11.95□□□□□ -0.5
PCOLCE-208ENST00000487172 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
PCOLCE-208ENST00000487172 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
PCOLCE-208ENST00000487172 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
PCOLCE-208ENST00000487172 C1orf137Q5JT78 98 aa11.93□□□□□ -0.5
PCOLCE-208ENST00000487172 NCR3O14931 201 aa11.92□□□□□ -0.5
PCOLCE-208ENST00000487172 SLC25A34Q6PIV7 304 aa11.91□□□□□ -0.5
PCOLCE-208ENST00000487172 IGKV2-28A0A075B6P5 120 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 IGKV2D-28P01615 120 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 S100A12P80511 92 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 HIGD1BQ9P298 99 aa11.9□□□□□ -0.5
PCOLCE-208ENST00000487172 LOC105371267A0A1B0GV96 52 aa11.89□□□□□ -0.51
PCOLCE-208ENST00000487172 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
PCOLCE-208ENST00000487172 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
PCOLCE-208ENST00000487172 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
PCOLCE-208ENST00000487172 TRBV10-3A0A0K0K1G6 114 aa11.87□□□□□ -0.51
PCOLCE-208ENST00000487172 BCE1O60756 84 aa11.87□□□□□ -0.51
PCOLCE-208ENST00000487172 REG3GQ6UW15 175 aa11.86□□□□□ -0.51
PCOLCE-208ENST00000487172 SPINK6Q6UWN8 80 aa11.86□□□□□ -0.51
PCOLCE-208ENST00000487172 KCNQ1DNQ9H478 68 aa11.86□□□□□ -0.51
PCOLCE-208ENST00000487172 PRYO14603 147 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 IGLV6-57P01721 117 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 SMIM6P0DI80 62 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 DDTP30046 118 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 C2orf91Q6ZV80 131 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 TMEM126AQ9H061 195 aa11.85□□□□□ -0.51
PCOLCE-208ENST00000487172 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
PCOLCE-208ENST00000487172 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
PCOLCE-208ENST00000487172 ZNF861PO60384 105 aa11.82□□□□□ -0.52
PCOLCE-208ENST00000487172 SPRR1AP35321 89 aa11.82□□□□□ -0.52
PCOLCE-208ENST00000487172 LINC00337Q8N6G1 96 aa11.81□□□□□ -0.52
PCOLCE-208ENST00000487172 CBY1Q9Y3M2 126 aa11.81□□□□□ -0.52
PCOLCE-208ENST00000487172 SRRM2Q9UQ35 2752 aaKnown RBP11.81□□□□□ -0.52
PCOLCE-208ENST00000487172 UQCR10Q9UDW1 63 aa11.8□□□□□ -0.52
PCOLCE-208ENST00000487172 RPL28P46779 137 aaKnown RBP11.79□□□□□ -0.52
PCOLCE-208ENST00000487172 TAL2Q16559 108 aa11.79□□□□□ -0.52
PCOLCE-208ENST00000487172 KRTAP13-1Q8IUC0 172 aa11.79□□□□□ -0.52
PCOLCE-208ENST00000487172 A4D1N5 150 aa11.78□□□□□ -0.52
PCOLCE-208ENST00000487172 KRTAP4-16G5E9R7 235 aaPredicted RBP11.78□□□□□ -0.52
PCOLCE-208ENST00000487172 OR13C6PQ8NH95 151 aa11.78□□□□□ -0.52
PCOLCE-208ENST00000487172 DIRC1Q969H9 104 aa11.78□□□□□ -0.52
PCOLCE-208ENST00000487172 FAM19A1Q7Z5A9 133 aa11.77□□□□□ -0.53
PCOLCE-208ENST00000487172 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
PCOLCE-208ENST00000487172 TRAV13-2A0A0B4J235 113 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms