RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PRO2289Q9P1D8 64 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 INTS1Q8N201 2190 aaKnown RBP1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 BAHCC1Q9P281 2608 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 ICE1Q9Y2F5 2266 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 IGLV3-9A0A075B6K5 115 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 A6NN06 94 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00158P58513 81 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 KRTAP13-4Q3LI77 160 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 Q8N814 137 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 MED12Q93074 2177 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 ZNF625Q96I27 306 aaPredicted RBP1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00208Q96KT6 92 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 GAFA1Q96PS6 74 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 BPESC1Q9GZL8 116 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 WFDC10AQ9H1F0 79 aa1.36□□□□□ -2.19
SNRNP27-204ENST00000487029 ARFGEF3Q5TH69 2177 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 ARHGAP32A7KAX9 2087 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 TRAV10A0A0B4J240 114 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 I3L2K1 104 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 RPL39P62891 51 aaKnown RBP1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 SPAG11BQ08648 103 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 Q6ZQT0 140 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 Q8TAT8 98 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 SMIM11BQ8TCY0 68 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 KLK9Q9UKQ9 250 aa1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 DIDO1Q9BTC0 2240 aaKnown RBP1.35□□□□□ -2.19
SNRNP27-204ENST00000487029 USF3Q68DE3 2245 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 TRGV2A0A075B6R0 118 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 TRBV6-4A0A1B0GX49 114 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 K7EIM0 57 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 NDUFA4O00483 81 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 PRB4P10163 310 aaPredicted RBP1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 COX7BP24311 80 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 COX17Q14061 63 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 Q5VV11 94 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 SPAG11AQ6PDA7 123 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 Q6ZTI0 123 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 COX7B2Q8TF08 81 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 LEAP2Q969E1 77 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 CDC42SE2Q9NRR3 84 aa1.34□□□□□ -2.19
SNRNP27-204ENST00000487029 ESPL1Q14674 2120 aa1.34□□□□□ -2.2
SNRNP27-204ENST00000487029 SPTY2D1-AS1A0A0U1RR47 76 aa1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 IGKV2-29A2NJV5 120 aaPredicted RBP1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 H0Y9P7 68 aa1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 MSMBP08118 114 aa1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 FDCSPQ8NFU4 85 aa1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 UNC13CQ8NB66 2214 aa1.33□□□□□ -2.2
SNRNP27-204ENST00000487029 M0QY20 66 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 DEFB112Q30KQ8 113 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 C10orf55Q5SWW7 151 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 TOMM7Q9P0U1 55 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 CDKN2A-AS1Q9UH64 79 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 C22orf24Q9Y442 160 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 FREM1Q5H8C1 2179 aa1.32□□□□□ -2.2
SNRNP27-204ENST00000487029 PI4KAP42356 2102 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 ALPK2Q86TB3 2170 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 LCE6AA0A183 80 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 RNASE3P12724 160 aaKnown RBP1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 CCL3L1P16619 93 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 CCL18P55774 89 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 LINC00575Q6W349 94 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 DEFB108BQ8NET1 73 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 PATE1Q8WXA2 126 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 KNTC1P50748 2209 aa1.31□□□□□ -2.2
SNRNP27-204ENST00000487029 ZGRF1Q86YA3 2104 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 COL4A5P29400 1685 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 H3BUA1 57 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 UQCR11O14957 56 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 APELAP0DMC3 54 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 MINOS1Q5TGZ0 78 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 COA5Q86WW8 74 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 Q8IZM0 81 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 SPACA4Q8TDM5 124 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 USMG5Q96IX5 58 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 KCNQ1DNQ9H478 68 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 KAAG1Q9UBP8 84 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 MALRD1Q5VYJ5 2156 aa1.3□□□□□ -2.2
SNRNP27-204ENST00000487029 ZFHX3Q15911 3703 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 TFF1P04155 84 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 CNBPP62633 177 aaKnown RBP1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 DEFB133Q30KQ1 61 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 C1orf134Q5TEV5 83 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 Q6ZQY7 126 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 DMAC1Q96GE9 116 aa1.29□□□□□ -2.2
SNRNP27-204ENST00000487029 RP1P56715 2156 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 DOCK10Q96BY6 2186 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 DEFB131BA0A096LNP1 70 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 A0A1B0GU69 56 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 CCL5P13501 91 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 PRB3Q04118 309 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms