RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
SEMA4D-219ENST00000486935 RPL37AP61513 92 aaKnown RBP9.83□□□□□ -0.84
SEMA4D-219ENST00000486935 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
SEMA4D-219ENST00000486935 LOC107984640A0A0U1RRK4 108 aa9.82□□□□□ -0.84
SEMA4D-219ENST00000486935 DLEU1O43261 78 aa9.82□□□□□ -0.84
SEMA4D-219ENST00000486935 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
SEMA4D-219ENST00000486935 LINC00587B1AMM8 73 aa9.81□□□□□ -0.84
SEMA4D-219ENST00000486935 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 COX17Q14061 63 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 DAND5Q8N907 189 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 UQCR10Q9UDW1 63 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
SEMA4D-219ENST00000486935 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 TIMM17BO60830 172 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 Q6ZRP5 223 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
SEMA4D-219ENST00000486935 LRP1Q07954 4544 aaKnown RBP9.78□□□□□ -0.84
SEMA4D-219ENST00000486935 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
SEMA4D-219ENST00000486935 NPC2P61916 151 aa9.78□□□□□ -0.84
SEMA4D-219ENST00000486935 ADAMTSL4-AS1Q5T5F5 129 aa9.78□□□□□ -0.84
SEMA4D-219ENST00000486935 LITAFQ99732 161 aa9.78□□□□□ -0.84
SEMA4D-219ENST00000486935 A0A096LNI7 61 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 TSTD3H0UI37 97 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 OXTP01178 125 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
SEMA4D-219ENST00000486935 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
SEMA4D-219ENST00000486935 HNRNPA3P51991 378 aaKnown RBP9.76□□□□□ -0.85
SEMA4D-219ENST00000486935 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
SEMA4D-219ENST00000486935 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
SEMA4D-219ENST00000486935 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
SEMA4D-219ENST00000486935 A0A087WYN8 130 aa9.75□□□□□ -0.85
SEMA4D-219ENST00000486935 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
SEMA4D-219ENST00000486935 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
SEMA4D-219ENST00000486935 HIGD1BQ9P298 99 aa9.75□□□□□ -0.85
SEMA4D-219ENST00000486935 SRSF9Q13242 221 aaKnown RBP eCLIP9.74□□□□□ -0.85
SEMA4D-219ENST00000486935 SPACA4Q8TDM5 124 aa9.74□□□□□ -0.85
SEMA4D-219ENST00000486935 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-219ENST00000486935 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-219ENST00000486935 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
SEMA4D-219ENST00000486935 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
SEMA4D-219ENST00000486935 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
SEMA4D-219ENST00000486935 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.86
SEMA4D-219ENST00000486935 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-219ENST00000486935 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
SEMA4D-219ENST00000486935 Q6ZVH6 145 aa9.7□□□□□ -0.86
SEMA4D-219ENST00000486935 MUSTN1Q8IVN3 82 aa9.7□□□□□ -0.86
SEMA4D-219ENST00000486935 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
SEMA4D-219ENST00000486935 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
SEMA4D-219ENST00000486935 LINC00474Q9P2X8 69 aa9.69□□□□□ -0.86
SEMA4D-219ENST00000486935 IFITM1P13164 125 aa9.68□□□□□ -0.86
SEMA4D-219ENST00000486935 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-219ENST00000486935 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
SEMA4D-219ENST00000486935 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
SEMA4D-219ENST00000486935 HSD52Q0P140 79 aa9.67□□□□□ -0.86
SEMA4D-219ENST00000486935 TAL2Q16559 108 aa9.67□□□□□ -0.86
SEMA4D-219ENST00000486935 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
SEMA4D-219ENST00000486935 DDTP30046 118 aa9.66□□□□□ -0.86
SEMA4D-219ENST00000486935 CTAG1AP78358 180 aa9.66□□□□□ -0.86
SEMA4D-219ENST00000486935 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
SEMA4D-219ENST00000486935 Q8NDZ9 215 aa9.66□□□□□ -0.86
SEMA4D-219ENST00000486935 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
SEMA4D-219ENST00000486935 NCR3O14931 201 aa9.65□□□□□ -0.86
SEMA4D-219ENST00000486935 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
SEMA4D-219ENST00000486935 CEND1Q8N111 149 aa9.65□□□□□ -0.86
SEMA4D-219ENST00000486935 VPREB1P12018 145 aa9.64□□□□□ -0.87
SEMA4D-219ENST00000486935 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
SEMA4D-219ENST00000486935 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 A4D1N5 150 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 NKAPP1Q8N9T2 125 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
SEMA4D-219ENST00000486935 M0QXV9 152 aa9.62□□□□□ -0.87
SEMA4D-219ENST00000486935 NDUFC2O95298 119 aa9.61□□□□□ -0.87
SEMA4D-219ENST00000486935 FXYD2P54710 66 aa9.61□□□□□ -0.87
SEMA4D-219ENST00000486935 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
SEMA4D-219ENST00000486935 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
SEMA4D-219ENST00000486935 HINT1P49773 126 aaPredicted RBP9.6□□□□□ -0.87
SEMA4D-219ENST00000486935 C22orf24Q9Y442 160 aa9.6□□□□□ -0.87
SEMA4D-219ENST00000486935 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
SEMA4D-219ENST00000486935 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
SEMA4D-219ENST00000486935 A6NJY4 79 aa9.59□□□□□ -0.87
SEMA4D-219ENST00000486935 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-219ENST00000486935 IGKV2-28A0A075B6P5 120 aa9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 M0R143 59 aa9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 M0R378 163 aa9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 IGKV2D-28P01615 120 aa9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
SEMA4D-219ENST00000486935 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
SEMA4D-219ENST00000486935 BATFQ16520 125 aa9.56□□□□□ -0.88
SEMA4D-219ENST00000486935 S100A7L2Q5SY68 101 aa9.56□□□□□ -0.88
SEMA4D-219ENST00000486935 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms