RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 A0A1B0GX51 115 aa12.13□□□□□ -0.47
PDLIM7-207ENST00000486828 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
PDLIM7-207ENST00000486828 KPRPQ5T749 579 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-207ENST00000486828 Q8NDZ9 215 aa12.13□□□□□ -0.47
PDLIM7-207ENST00000486828 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 OBSCN-AS1Q96MR7 158 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 NBEAL1Q6ZS30 2694 aa12.12□□□□□ -0.47
PDLIM7-207ENST00000486828 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
PDLIM7-207ENST00000486828 LINC00167Q96N53 147 aa12.11□□□□□ -0.47
PDLIM7-207ENST00000486828 NCR3O14931 201 aa12.11□□□□□ -0.47
PDLIM7-207ENST00000486828 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-207ENST00000486828 ORMDL1Q9P0S3 153 aa12.11□□□□□ -0.47
PDLIM7-207ENST00000486828 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-207ENST00000486828 SLPIP03973 132 aa12.1□□□□□ -0.47
PDLIM7-207ENST00000486828 GAGE2AQ6NT46 116 aa12.1□□□□□ -0.47
PDLIM7-207ENST00000486828 Q6ZTC4 211 aa12.1□□□□□ -0.47
PDLIM7-207ENST00000486828 B5MCH6 92 aa12.09□□□□□ -0.47
PDLIM7-207ENST00000486828 LINC00643Q86TS7 51 aa12.09□□□□□ -0.47
PDLIM7-207ENST00000486828 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
PDLIM7-207ENST00000486828 NHLRC4P0CG21 123 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-207ENST00000486828 Q8N814 137 aa12.08□□□□□ -0.48
PDLIM7-207ENST00000486828 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
PDLIM7-207ENST00000486828 C14orf132Q9NPU4 83 aa12.07□□□□□ -0.48
PDLIM7-207ENST00000486828 IMUPQ9GZP8 106 aa12.06□□□□□ -0.48
PDLIM7-207ENST00000486828 C6orf99Q4VX62 202 aa12.05□□□□□ -0.48
PDLIM7-207ENST00000486828 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
PDLIM7-207ENST00000486828 KRTAP26-1Q6PEX3 210 aa12.03□□□□□ -0.48
PDLIM7-207ENST00000486828 IGLV6-57P01721 117 aa12.02□□□□□ -0.49
PDLIM7-207ENST00000486828 ESRGQ1W209 222 aa12.02□□□□□ -0.49
PDLIM7-207ENST00000486828 TMEM256-PLSCR3K7ERE1 68 aa12.01□□□□□ -0.49
PDLIM7-207ENST00000486828 RPL18AQ02543 176 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-207ENST00000486828 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
PDLIM7-207ENST00000486828 LINC00575Q6W349 94 aa12□□□□□ -0.49
PDLIM7-207ENST00000486828 HIGD2BQ4VC39 106 aa11.99□□□□□ -0.49
PDLIM7-207ENST00000486828 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
PDLIM7-207ENST00000486828 JMJD7-PLA2G4BH0Y9G9 81 aa11.99□□□□□ -0.49
PDLIM7-207ENST00000486828 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
PDLIM7-207ENST00000486828 C11orf45Q8TAV5 145 aa11.98□□□□□ -0.49
PDLIM7-207ENST00000486828 MRAPQ8TCY5 172 aa11.98□□□□□ -0.49
PDLIM7-207ENST00000486828 XAGE1AQ9HD64 81 aa11.98□□□□□ -0.49
PDLIM7-207ENST00000486828 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
PDLIM7-207ENST00000486828 C15orf56Q8N910 161 aa11.97□□□□□ -0.49
PDLIM7-207ENST00000486828 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.5
PDLIM7-207ENST00000486828 hADV29S1A0JD25 119 aa11.96□□□□□ -0.5
PDLIM7-207ENST00000486828 CCKP06307 115 aa11.96□□□□□ -0.5
PDLIM7-207ENST00000486828 LINC00846Q9NV44 126 aa11.96□□□□□ -0.5
PDLIM7-207ENST00000486828 TRBV10-3A0A0K0K1G6 114 aa11.95□□□□□ -0.5
PDLIM7-207ENST00000486828 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
PDLIM7-207ENST00000486828 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
PDLIM7-207ENST00000486828 FAM236AA0A1B0GUQ0 79 aa11.94□□□□□ -0.5
PDLIM7-207ENST00000486828 FAM236BA0A1B0GV22 79 aa11.94□□□□□ -0.5
PDLIM7-207ENST00000486828 Q6ZRU5 148 aa11.94□□□□□ -0.5
PDLIM7-207ENST00000486828 TRAV23DV6A0A075B6W5 121 aa11.93□□□□□ -0.5
PDLIM7-207ENST00000486828 CCDC179H3BU77 68 aa11.92□□□□□ -0.5
PDLIM7-207ENST00000486828 VPREB1P12018 145 aa11.92□□□□□ -0.5
PDLIM7-207ENST00000486828 Q6JHZ5 121 aa11.91□□□□□ -0.5
PDLIM7-207ENST00000486828 DIRC1Q969H9 104 aa11.91□□□□□ -0.5
PDLIM7-207ENST00000486828 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
PDLIM7-207ENST00000486828 IGKV2D-24A0A075B6R9 120 aa11.9□□□□□ -0.51
PDLIM7-207ENST00000486828 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-207ENST00000486828 DNAH10OSP0CZ25 163 aa11.88□□□□□ -0.51
PDLIM7-207ENST00000486828 M0R378 163 aa11.87□□□□□ -0.51
PDLIM7-207ENST00000486828 H3BQ85 93 aa11.86□□□□□ -0.51
PDLIM7-207ENST00000486828 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
PDLIM7-207ENST00000486828 TRBV7-6A0A0J9YX20 115 aa11.86□□□□□ -0.51
PDLIM7-207ENST00000486828 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-207ENST00000486828 Q6ZQY7 126 aa11.86□□□□□ -0.51
PDLIM7-207ENST00000486828 IGKV3D-7A0A0C4DH55 119 aa11.85□□□□□ -0.51
PDLIM7-207ENST00000486828 COX7BP24311 80 aa11.85□□□□□ -0.51
PDLIM7-207ENST00000486828 ELOF1P60002 83 aaKnown RBP11.84□□□□□ -0.51
PDLIM7-207ENST00000486828 RBM3P98179 157 aaKnown RBP11.84□□□□□ -0.51
PDLIM7-207ENST00000486828 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
PDLIM7-207ENST00000486828 Q6ZRP5 223 aa11.84□□□□□ -0.51
PDLIM7-207ENST00000486828 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
PDLIM7-207ENST00000486828 HIST1H4AP62805 103 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-207ENST00000486828 LAMTOR3Q9UHA4 124 aa11.83□□□□□ -0.52
PDLIM7-207ENST00000486828 LOC110117498A0A087WWA1 95 aa11.82□□□□□ -0.52
PDLIM7-207ENST00000486828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.82□□□□□ -0.52
PDLIM7-207ENST00000486828 Q6ZQT0 140 aa11.82□□□□□ -0.52
PDLIM7-207ENST00000486828 TM2D3Q9BRN9 247 aa11.82□□□□□ -0.52
PDLIM7-207ENST00000486828 LINC00588Q9Y4M8 146 aa11.8□□□□□ -0.52
PDLIM7-207ENST00000486828 RPS28P62857 69 aaKnown RBP11.8□□□□□ -0.52
PDLIM7-207ENST00000486828 MEGF8Q7Z7M0 2845 aa11.8□□□□□ -0.52
PDLIM7-207ENST00000486828 K7EIL1 84 aa11.79□□□□□ -0.52
PDLIM7-207ENST00000486828 ATP5EP2Q5VTU8 51 aa11.78□□□□□ -0.52
PDLIM7-207ENST00000486828 GHRHP01286 108 aa11.78□□□□□ -0.52
PDLIM7-207ENST00000486828 ATOX1O00244 68 aa11.76□□□□□ -0.53
PDLIM7-207ENST00000486828 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
PDLIM7-207ENST00000486828 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
PDLIM7-207ENST00000486828 UBL5Q9BZL1 73 aa11.76□□□□□ -0.53
PDLIM7-207ENST00000486828 PDE6GP18545 87 aa11.76□□□□□ -0.53
PDLIM7-207ENST00000486828 J3KT08 172 aa11.75□□□□□ -0.53
PDLIM7-207ENST00000486828 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
PDLIM7-207ENST00000486828 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
PDLIM7-207ENST00000486828 A0A087WVE0 104 aa11.74□□□□□ -0.53
PDLIM7-207ENST00000486828 UQCRQO14949 82 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms