RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SORL1Q92673 2214 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 UQCR11O14957 56 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 ZNF861PO60384 105 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 RNASE3P12724 160 aaKnown RBP3.35□□□□□ -1.87
COPS3-209ENST00000486810 DMAC1Q96GE9 116 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 ZNF318Q5VUA4 2279 aa3.35□□□□□ -1.87
COPS3-209ENST00000486810 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
COPS3-209ENST00000486810 A6NDX4 124 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 K7EIM0 57 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 IGHV1-46P01743 117 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 Q8N9W7 124 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 C7orf33Q8WU49 177 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 CNTRLQ7Z7A1 2325 aa3.33□□□□□ -1.88
COPS3-209ENST00000486810 SDK1Q7Z5N4 2213 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 ODF3BA8MYP8 253 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 DEFB113Q30KQ7 82 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 Q8N9L7 120 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 URB1O60287 2271 aaKnown RBP3.32□□□□□ -1.88
COPS3-209ENST00000486810 A0A0C4DFX4 3053 aa3.32□□□□□ -1.88
COPS3-209ENST00000486810 NUPR2A6NF83 97 aa3.31□□□□□ -1.88
COPS3-209ENST00000486810 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.31□□□□□ -1.88
COPS3-209ENST00000486810 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
COPS3-209ENST00000486810 RNF5Q99942 180 aa3.31□□□□□ -1.88
COPS3-209ENST00000486810 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
COPS3-209ENST00000486810 COX6A2Q02221 97 aa3.3□□□□□ -1.88
COPS3-209ENST00000486810 Q6ZQY7 126 aa3.3□□□□□ -1.88
COPS3-209ENST00000486810 TMEM105Q8N8V8 129 aa3.3□□□□□ -1.88
COPS3-209ENST00000486810 DEC1Q9P2X7 70 aa3.3□□□□□ -1.88
COPS3-209ENST00000486810 DEFB131BA0A096LNP1 70 aa3.29□□□□□ -1.88
COPS3-209ENST00000486810 CCL3L1P16619 93 aa3.29□□□□□ -1.88
COPS3-209ENST00000486810 C10orf55Q5SWW7 151 aa3.29□□□□□ -1.88
COPS3-209ENST00000486810 MED13LQ71F56 2210 aa3.29□□□□□ -1.88
COPS3-209ENST00000486810 ABCA4P78363 2273 aa3.28□□□□□ -1.88
COPS3-209ENST00000486810 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
COPS3-209ENST00000486810 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
COPS3-209ENST00000486810 MRPL33O75394 65 aaKnown RBP3.28□□□□□ -1.88
COPS3-209ENST00000486810 PRB1P04280 392 aa3.28□□□□□ -1.88
COPS3-209ENST00000486810 Q5W150 140 aa3.28□□□□□ -1.88
COPS3-209ENST00000486810 PLCE1Q9P212 2302 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 ASCC3Q8N3C0 2202 aaKnown RBP3.27□□□□□ -1.89
COPS3-209ENST00000486810 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 KLK9Q2XQG4 91 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 PRR9Q5T870 116 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
COPS3-209ENST00000486810 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 A0A1B0GVX0 72 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 A8MUU9 505 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
COPS3-209ENST00000486810 COX17Q14061 63 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 Q8IZM0 81 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 CIRBP-AS1Q8TBR5 109 aa3.26□□□□□ -1.89
COPS3-209ENST00000486810 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
COPS3-209ENST00000486810 PRB3Q04118 309 aaPredicted RBP3.25□□□□□ -1.89
COPS3-209ENST00000486810 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
COPS3-209ENST00000486810 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
COPS3-209ENST00000486810 LINC00472Q9H8W2 130 aa3.24□□□□□ -1.89
COPS3-209ENST00000486810 KLK12Q9UKR0 248 aa3.24□□□□□ -1.89
COPS3-209ENST00000486810 IGLV5-48A0A075B6I7 105 aa3.23□□□□□ -1.89
COPS3-209ENST00000486810 A0A1W2PNU3 283 aaPredicted RBP3.23□□□□□ -1.89
COPS3-209ENST00000486810 PANO1I0J062 215 aa3.23□□□□□ -1.89
COPS3-209ENST00000486810 TLX1NBP0CAT3 122 aa3.23□□□□□ -1.89
COPS3-209ENST00000486810 HRES1P13985 223 aa3.23□□□□□ -1.89
COPS3-209ENST00000486810 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
COPS3-209ENST00000486810 ASXL3Q9C0F0 2248 aa3.22□□□□□ -1.89
COPS3-209ENST00000486810 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
COPS3-209ENST00000486810 KNL1Q8NG31 2342 aa3.22□□□□□ -1.89
COPS3-209ENST00000486810 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
COPS3-209ENST00000486810 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
COPS3-209ENST00000486810 CCL26Q9Y258 94 aa3.21□□□□□ -1.9
COPS3-209ENST00000486810 BRWD1Q9NSI6 2320 aa3.21□□□□□ -1.9
COPS3-209ENST00000486810 A0A1B0GU69 56 aa3.2□□□□□ -1.9
COPS3-209ENST00000486810 DEFB110Q30KQ9 67 aa3.2□□□□□ -1.9
COPS3-209ENST00000486810 DOPEY2Q9Y3R5 2298 aa3.19□□□□□ -1.9
COPS3-209ENST00000486810 A0A087WTM6 91 aa3.19□□□□□ -1.9
COPS3-209ENST00000486810 Q9Y3F1 56 aa3.19□□□□□ -1.9
COPS3-209ENST00000486810 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
COPS3-209ENST00000486810 KMT2BQ9UMN6 2715 aaPredicted RBP3.18□□□□□ -1.9
COPS3-209ENST00000486810 K7EQZ3 153 aa3.18□□□□□ -1.9
COPS3-209ENST00000486810 TP53AIP1Q9HCN2 124 aa3.18□□□□□ -1.9
COPS3-209ENST00000486810 MINOS1-NBL1R4GNA1 71 aa3.18□□□□□ -1.9
COPS3-209ENST00000486810 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
COPS3-209ENST00000486810 ACYP2P14621 99 aa3.17□□□□□ -1.9
COPS3-209ENST00000486810 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
COPS3-209ENST00000486810 CD52P31358 61 aa3.17□□□□□ -1.9
COPS3-209ENST00000486810 PRO3102Q9H379 93 aa3.17□□□□□ -1.9
COPS3-209ENST00000486810 DEFB132Q7Z7B7 95 aa3.16□□□□□ -1.9
COPS3-209ENST00000486810 AHCTF1Q8WYP5 2266 aa3.16□□□□□ -1.9
COPS3-209ENST00000486810 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
COPS3-209ENST00000486810 ZNRD1Q9P1U0 126 aa3.15□□□□□ -1.91
COPS3-209ENST00000486810 KAAG1Q9UBP8 84 aa3.15□□□□□ -1.91
COPS3-209ENST00000486810 ABCA1O95477 2261 aa3.15□□□□□ -1.91
COPS3-209ENST00000486810 LYNX1G3V0Z9 82 aa3.14□□□□□ -1.91
COPS3-209ENST00000486810 INSP01308 110 aa3.14□□□□□ -1.91
COPS3-209ENST00000486810 ANGP03950 147 aaKnown RBP3.14□□□□□ -1.91
COPS3-209ENST00000486810 APELAP0DMC3 54 aa3.14□□□□□ -1.91
COPS3-209ENST00000486810 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms