RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 PMVKQ15126 192 aa8.48□□□□□ -1.05
DCLK1-207ENST00000486239 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
DCLK1-207ENST00000486239 LINC00242Q5T6M2 205 aa8.48□□□□□ -1.05
DCLK1-207ENST00000486239 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
DCLK1-207ENST00000486239 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
DCLK1-207ENST00000486239 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
DCLK1-207ENST00000486239 E9PLD3 99 aa8.47□□□□□ -1.05
DCLK1-207ENST00000486239 AMELXQ99217 191 aa8.47□□□□□ -1.05
DCLK1-207ENST00000486239 PRSS2P07478 247 aa8.46□□□□□ -1.06
DCLK1-207ENST00000486239 SMIM13P0DJ93 91 aa8.46□□□□□ -1.06
DCLK1-207ENST00000486239 FAM19A3Q7Z5A8 133 aa8.46□□□□□ -1.06
DCLK1-207ENST00000486239 TNXBP22105 4242 aa8.46□□□□□ -1.06
DCLK1-207ENST00000486239 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 HERVK_113P63121 156 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
DCLK1-207ENST00000486239 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 A6NJY4 79 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
DCLK1-207ENST00000486239 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 CEND1Q8N111 149 aa8.44□□□□□ -1.06
DCLK1-207ENST00000486239 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 CKS1BP61024 79 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 Q8IZM0 81 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
DCLK1-207ENST00000486239 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
DCLK1-207ENST00000486239 FABP2P12104 132 aa8.42□□□□□ -1.06
DCLK1-207ENST00000486239 CXCL5P42830 114 aa8.42□□□□□ -1.06
DCLK1-207ENST00000486239 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
DCLK1-207ENST00000486239 HIST1H4GQ99525 98 aa8.42□□□□□ -1.06
DCLK1-207ENST00000486239 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
DCLK1-207ENST00000486239 Q6ZVH6 145 aa8.41□□□□□ -1.06
DCLK1-207ENST00000486239 A0A1W2PPM0 123 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 K7EP34 96 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 C1orf137Q5JT78 98 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 DIRC1Q969H9 104 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
DCLK1-207ENST00000486239 H3BUT2 72 aa8.39□□□□□ -1.07
DCLK1-207ENST00000486239 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
DCLK1-207ENST00000486239 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
DCLK1-207ENST00000486239 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
DCLK1-207ENST00000486239 M0QXV9 152 aa8.38□□□□□ -1.07
DCLK1-207ENST00000486239 FXYD2P54710 66 aa8.38□□□□□ -1.07
DCLK1-207ENST00000486239 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
DCLK1-207ENST00000486239 PLEKHB2Q96CS7 222 aa8.38□□□□□ -1.07
DCLK1-207ENST00000486239 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
DCLK1-207ENST00000486239 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
DCLK1-207ENST00000486239 UBE2BP63146 152 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 LYRM7Q5U5X0 104 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
DCLK1-207ENST00000486239 NHP2Q9NX24 153 aaKnown RBP8.37□□□□□ -1.07
DCLK1-207ENST00000486239 SPCS1Q9Y6A9 102 aa8.37□□□□□ -1.07
DCLK1-207ENST00000486239 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 A0A1B0GWB2 263 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 RAB37Q96AX2 223 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
DCLK1-207ENST00000486239 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
DCLK1-207ENST00000486239 K7ERU9 68 aa8.35□□□□□ -1.07
DCLK1-207ENST00000486239 LEPROTO15243 131 aa8.35□□□□□ -1.07
DCLK1-207ENST00000486239 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
DCLK1-207ENST00000486239 J3QQQ9 107 aa8.34□□□□□ -1.07
DCLK1-207ENST00000486239 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
DCLK1-207ENST00000486239 H0Y9J4 135 aa8.33□□□□□ -1.08
DCLK1-207ENST00000486239 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
DCLK1-207ENST00000486239 SMIM1B2RUZ4 78 aa8.32□□□□□ -1.08
DCLK1-207ENST00000486239 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
DCLK1-207ENST00000486239 UBR4Q5T4S7 5183 aa8.31□□□□□ -1.08
DCLK1-207ENST00000486239 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
DCLK1-207ENST00000486239 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
DCLK1-207ENST00000486239 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
DCLK1-207ENST00000486239 OCIAD2Q56VL3 154 aa8.3□□□□□ -1.08
DCLK1-207ENST00000486239 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
DCLK1-207ENST00000486239 K7ERJ3 54 aa8.29□□□□□ -1.08
DCLK1-207ENST00000486239 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
DCLK1-207ENST00000486239 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
DCLK1-207ENST00000486239 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
DCLK1-207ENST00000486239 F8W1H4 67 aa8.28□□□□□ -1.08
DCLK1-207ENST00000486239 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
DCLK1-207ENST00000486239 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
DCLK1-207ENST00000486239 MRPL55Q7Z7F7 128 aaKnown RBP8.27□□□□□ -1.09
DCLK1-207ENST00000486239 LRP2P98164 4655 aa8.27□□□□□ -1.09
DCLK1-207ENST00000486239 J3QR89 54 aa8.26□□□□□ -1.09
DCLK1-207ENST00000486239 ZNF861PO60384 105 aa8.26□□□□□ -1.09
DCLK1-207ENST00000486239 NAA38Q9BRA0 125 aaKnown RBP8.26□□□□□ -1.09
DCLK1-207ENST00000486239 TRBV20-1A0A075B6N2 111 aa8.25□□□□□ -1.09
DCLK1-207ENST00000486239 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms