RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 NDUFA12Q9UI09 145 aa6.22□□□□□ -1.41
SND1-213ENST00000486037 A0A0J9YXY3 114 aa6.21□□□□□ -1.42
SND1-213ENST00000486037 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
SND1-213ENST00000486037 C15orf56Q8N910 161 aa6.21□□□□□ -1.42
SND1-213ENST00000486037 RMI2Q96E14 147 aa6.21□□□□□ -1.42
SND1-213ENST00000486037 ZNF625Q96I27 306 aaPredicted RBP6.21□□□□□ -1.42
SND1-213ENST00000486037 LINC00587B1AMM8 73 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 APOMO95445 188 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 CTAG1AP78358 180 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 Q8IZM0 81 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
SND1-213ENST00000486037 PRSS2P07478 247 aa6.19□□□□□ -1.42
SND1-213ENST00000486037 SPAG11BQ08648 103 aa6.19□□□□□ -1.42
SND1-213ENST00000486037 C2orf82Q6UX34 121 aa6.19□□□□□ -1.42
SND1-213ENST00000486037 SCGB1D4Q6XE38 83 aa6.19□□□□□ -1.42
SND1-213ENST00000486037 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
SND1-213ENST00000486037 C6orf226Q5I0X4 101 aa6.18□□□□□ -1.42
SND1-213ENST00000486037 LITAFQ99732 161 aa6.18□□□□□ -1.42
SND1-213ENST00000486037 GVQW2A0A096LPI5 108 aaPredicted RBP6.17□□□□□ -1.42
SND1-213ENST00000486037 HERV-K104P63124 156 aa6.17□□□□□ -1.42
SND1-213ENST00000486037 CFAP161Q6P656 301 aa6.17□□□□□ -1.42
SND1-213ENST00000486037 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
SND1-213ENST00000486037 USP17L23D6RBM5 183 aa6.16□□□□□ -1.42
SND1-213ENST00000486037 CKS1BP61024 79 aa6.16□□□□□ -1.42
SND1-213ENST00000486037 ADAMTSL4-AS1Q5T5F5 129 aa6.16□□□□□ -1.42
SND1-213ENST00000486037 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
SND1-213ENST00000486037 SPANXB1Q9NS25 103 aaPredicted RBP6.16□□□□□ -1.42
SND1-213ENST00000486037 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 TIMM17BO60830 172 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 SMIM13P0DJ93 91 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 CXCL5P42830 114 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 HINT1P49773 126 aaPredicted RBP6.15□□□□□ -1.42
SND1-213ENST00000486037 HSD52Q0P140 79 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
SND1-213ENST00000486037 TMEM238C9JI98 176 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 TAL2Q16559 108 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 BVES-AS1Q5T3Y7 98 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 SFTA2Q6UW10 78 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 HIST1H4GQ99525 98 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 SPANXCQ9NY87 97 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
SND1-213ENST00000486037 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 SLPIP03973 132 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 SRSF9Q13242 221 aaKnown RBP eCLIP6.13□□□□□ -1.43
SND1-213ENST00000486037 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
SND1-213ENST00000486037 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 CEND1Q8N111 149 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 DAND5Q8N907 189 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 CAMK2N2Q96S95 79 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
SND1-213ENST00000486037 PFN2P35080 140 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 FXYD2P54710 66 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 LINC00158P58513 81 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
SND1-213ENST00000486037 MUC17Q685J3 4493 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
SND1-213ENST00000486037 F8WDY8 70 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 M0R143 59 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 NPC2P61916 151 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 SYCNQ0VAF6 134 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 BATFQ16520 125 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 MUSTN1Q8IVN3 82 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
SND1-213ENST00000486037 A0A087WYN8 130 aa6.1□□□□□ -1.43
SND1-213ENST00000486037 TRBV30A0A0K0K1B3 111 aa6.1□□□□□ -1.43
SND1-213ENST00000486037 Q6ZVH6 145 aa6.1□□□□□ -1.43
SND1-213ENST00000486037 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
SND1-213ENST00000486037 PTTG1IPP53801 180 aa6.09□□□□□ -1.43
SND1-213ENST00000486037 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
SND1-213ENST00000486037 COX17Q14061 63 aa6.09□□□□□ -1.43
SND1-213ENST00000486037 CARD19Q96LW7 228 aa6.09□□□□□ -1.43
SND1-213ENST00000486037 A4D1N5 150 aa6.08□□□□□ -1.44
SND1-213ENST00000486037 IFITM1P13164 125 aa6.08□□□□□ -1.44
SND1-213ENST00000486037 RNF151Q2KHN1 245 aa6.08□□□□□ -1.44
SND1-213ENST00000486037 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
SND1-213ENST00000486037 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
SND1-213ENST00000486037 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
SND1-213ENST00000486037 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
SND1-213ENST00000486037 A0A1B0GWB2 263 aa6.06□□□□□ -1.44
SND1-213ENST00000486037 K7ERJ3 54 aa6.06□□□□□ -1.44
SND1-213ENST00000486037 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
SND1-213ENST00000486037 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
SND1-213ENST00000486037 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
SND1-213ENST00000486037 PPDPFQ9H3Y8 114 aa6.06□□□□□ -1.44
SND1-213ENST00000486037 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 NDUFC2-KCTD14E9PQ53 114 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 CFC1BP0CG36 223 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 CFC1P0CG37 223 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 Q6ZRP5 223 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 Q8NDZ9 215 aa6.05□□□□□ -1.44
SND1-213ENST00000486037 PLAC8Q9NZF1 115 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms