RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 CXCL5P42830 114 aa8.05□□□□□ -1.12
SMARCD3-211ENST00000485592 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
SMARCD3-211ENST00000485592 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 UBE2AP49459 152 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 RETNLBQ9BQ08 111 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
SMARCD3-211ENST00000485592 H3BRM9 83 aa8.02□□□□□ -1.13
SMARCD3-211ENST00000485592 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
SMARCD3-211ENST00000485592 S100A1P23297 94 aa8.02□□□□□ -1.13
SMARCD3-211ENST00000485592 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SMARCD3-211ENST00000485592 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
SMARCD3-211ENST00000485592 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
SMARCD3-211ENST00000485592 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
SMARCD3-211ENST00000485592 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
SMARCD3-211ENST00000485592 GAGE10A6NGK3 116 aa8□□□□□ -1.13
SMARCD3-211ENST00000485592 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
SMARCD3-211ENST00000485592 COA6Q5JTJ3 125 aaKnown RBP8□□□□□ -1.13
SMARCD3-211ENST00000485592 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
SMARCD3-211ENST00000485592 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
SMARCD3-211ENST00000485592 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
SMARCD3-211ENST00000485592 FABP4P15090 132 aa7.99□□□□□ -1.13
SMARCD3-211ENST00000485592 FAT4Q6V0I7 4981 aa7.99□□□□□ -1.13
SMARCD3-211ENST00000485592 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
SMARCD3-211ENST00000485592 H0Y8G0 127 aa7.98□□□□□ -1.13
SMARCD3-211ENST00000485592 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
SMARCD3-211ENST00000485592 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
SMARCD3-211ENST00000485592 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
SMARCD3-211ENST00000485592 CTAG1AP78358 180 aa7.97□□□□□ -1.13
SMARCD3-211ENST00000485592 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SMARCD3-211ENST00000485592 ZNF625Q96I27 306 aaPredicted RBP7.97□□□□□ -1.13
SMARCD3-211ENST00000485592 PMCHL2Q9BQD1 86 aa7.96□□□□□ -1.14
SMARCD3-211ENST00000485592 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
SMARCD3-211ENST00000485592 IGKV2D-28P01615 120 aa7.95□□□□□ -1.14
SMARCD3-211ENST00000485592 TSPEAR-AS2P59090 65 aa7.94□□□□□ -1.14
SMARCD3-211ENST00000485592 MUC17Q685J3 4493 aa7.93□□□□□ -1.14
SMARCD3-211ENST00000485592 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
SMARCD3-211ENST00000485592 PLNP26678 52 aa7.93□□□□□ -1.14
SMARCD3-211ENST00000485592 PRLHP81277 87 aa7.93□□□□□ -1.14
SMARCD3-211ENST00000485592 FAM19A1Q7Z5A9 133 aa7.93□□□□□ -1.14
SMARCD3-211ENST00000485592 DPM2O94777 84 aa7.92□□□□□ -1.14
SMARCD3-211ENST00000485592 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
SMARCD3-211ENST00000485592 PPDPFQ9H3Y8 114 aa7.92□□□□□ -1.14
SMARCD3-211ENST00000485592 ERG28Q9UKR5 140 aa7.92□□□□□ -1.14
SMARCD3-211ENST00000485592 LINC01545Q5VT33 79 aa7.91□□□□□ -1.14
SMARCD3-211ENST00000485592 IGKCP01834 107 aa7.9□□□□□ -1.14
SMARCD3-211ENST00000485592 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
SMARCD3-211ENST00000485592 PFN2P35080 140 aa7.9□□□□□ -1.14
SMARCD3-211ENST00000485592 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
SMARCD3-211ENST00000485592 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
SMARCD3-211ENST00000485592 Q8NDZ9 215 aa7.89□□□□□ -1.15
SMARCD3-211ENST00000485592 COX17Q14061 63 aa7.88□□□□□ -1.15
SMARCD3-211ENST00000485592 SPAG11AQ6PDA7 123 aa7.88□□□□□ -1.15
SMARCD3-211ENST00000485592 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
SMARCD3-211ENST00000485592 TMEM238C9JI98 176 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 LEPROTO15243 131 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 VPREB1P12018 145 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 C3orf22Q8N5N4 141 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
SMARCD3-211ENST00000485592 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
SMARCD3-211ENST00000485592 HIST3H2BBQ8N257 126 aa7.86□□□□□ -1.15
SMARCD3-211ENST00000485592 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
SMARCD3-211ENST00000485592 E9PLD3 99 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 J3QQQ9 107 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 M0R378 163 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
SMARCD3-211ENST00000485592 A0A0U1RRA0 63 aa7.84□□□□□ -1.15
SMARCD3-211ENST00000485592 SMIM13P0DJ93 91 aa7.84□□□□□ -1.15
SMARCD3-211ENST00000485592 KRTDAPP60985 99 aa7.84□□□□□ -1.15
SMARCD3-211ENST00000485592 HERVK_113P61574 105 aa7.84□□□□□ -1.15
SMARCD3-211ENST00000485592 HERV-K104P63124 156 aa7.84□□□□□ -1.15
SMARCD3-211ENST00000485592 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
SMARCD3-211ENST00000485592 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
SMARCD3-211ENST00000485592 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
SMARCD3-211ENST00000485592 LINC00158P58513 81 aa7.82□□□□□ -1.16
SMARCD3-211ENST00000485592 MIR7-3HGQ8N6C7 128 aa7.82□□□□□ -1.16
SMARCD3-211ENST00000485592 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
SMARCD3-211ENST00000485592 NMUP48645 174 aa7.81□□□□□ -1.16
SMARCD3-211ENST00000485592 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
SMARCD3-211ENST00000485592 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
SMARCD3-211ENST00000485592 LGALS3P17931 250 aaKnown RBP7.8□□□□□ -1.16
SMARCD3-211ENST00000485592 ASB16-AS1Q495Z4 193 aa7.8□□□□□ -1.16
SMARCD3-211ENST00000485592 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
SMARCD3-211ENST00000485592 DAND5Q8N907 189 aa7.79□□□□□ -1.16
SMARCD3-211ENST00000485592 TTTY13Q9BZ97 58 aa7.79□□□□□ -1.16
SMARCD3-211ENST00000485592 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 ATOH7Q8N100 152 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 Q8NBF4 154 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 LITAFQ99732 161 aa7.78□□□□□ -1.16
SMARCD3-211ENST00000485592 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
SMARCD3-211ENST00000485592 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
SMARCD3-211ENST00000485592 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
SMARCD3-211ENST00000485592 SNRPEP62304 92 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms