RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 FAM168BA1KXE4 195 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 PRO1933Q9H354 126 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 SPANXB1Q9NS25 103 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-207ENST00000485465 UQCR10Q9UDW1 63 aa11.13□□□□□ -0.63
CHMP3-207ENST00000485465 A0A087WYN8 130 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 NPC2P61916 151 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 Q6ZVH6 145 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 HIGD1BQ9P298 99 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
CHMP3-207ENST00000485465 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
CHMP3-207ENST00000485465 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
CHMP3-207ENST00000485465 PLAC8Q9NZF1 115 aa11.11□□□□□ -0.63
CHMP3-207ENST00000485465 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
CHMP3-207ENST00000485465 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-207ENST00000485465 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHMP3-207ENST00000485465 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
CHMP3-207ENST00000485465 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-207ENST00000485465 KRTAP7-1Q8IUC3 87 aa11.1□□□□□ -0.63
CHMP3-207ENST00000485465 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
CHMP3-207ENST00000485465 IFITM1P13164 125 aa11.09□□□□□ -0.63
CHMP3-207ENST00000485465 HAMPP81172 84 aa11.09□□□□□ -0.63
CHMP3-207ENST00000485465 Q8NDZ9 215 aa11.09□□□□□ -0.63
CHMP3-207ENST00000485465 XGP55808 180 aa11.08□□□□□ -0.64
CHMP3-207ENST00000485465 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
CHMP3-207ENST00000485465 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
CHMP3-207ENST00000485465 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
CHMP3-207ENST00000485465 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
CHMP3-207ENST00000485465 VPREB1P12018 145 aa11.07□□□□□ -0.64
CHMP3-207ENST00000485465 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
CHMP3-207ENST00000485465 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
CHMP3-207ENST00000485465 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
CHMP3-207ENST00000485465 APOBP04114 4563 aaKnown RBP11.06□□□□□ -0.64
CHMP3-207ENST00000485465 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
CHMP3-207ENST00000485465 M0QXV9 152 aa11.04□□□□□ -0.64
CHMP3-207ENST00000485465 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
CHMP3-207ENST00000485465 NDUFC2O95298 119 aa11.04□□□□□ -0.64
CHMP3-207ENST00000485465 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
CHMP3-207ENST00000485465 PRR3P79522 188 aaKnown RBP11.04□□□□□ -0.64
CHMP3-207ENST00000485465 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
CHMP3-207ENST00000485465 TAL2Q16559 108 aa11.03□□□□□ -0.64
CHMP3-207ENST00000485465 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
CHMP3-207ENST00000485465 M0R378 163 aa11.01□□□□□ -0.65
CHMP3-207ENST00000485465 NCR3O14931 201 aa11.01□□□□□ -0.65
CHMP3-207ENST00000485465 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-207ENST00000485465 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
CHMP3-207ENST00000485465 HSD52Q0P140 79 aa11□□□□□ -0.65
CHMP3-207ENST00000485465 C7orf33Q8WU49 177 aa11□□□□□ -0.65
CHMP3-207ENST00000485465 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
CHMP3-207ENST00000485465 CEND1Q8N111 149 aa10.99□□□□□ -0.65
CHMP3-207ENST00000485465 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
CHMP3-207ENST00000485465 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
CHMP3-207ENST00000485465 A4D1N5 150 aa10.98□□□□□ -0.65
CHMP3-207ENST00000485465 GAGE10A6NGK3 116 aa10.98□□□□□ -0.65
CHMP3-207ENST00000485465 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
CHMP3-207ENST00000485465 UBE2BP63146 152 aa10.96□□□□□ -0.65
CHMP3-207ENST00000485465 BIRC6Q9NR09 4857 aa10.96□□□□□ -0.66
CHMP3-207ENST00000485465 RPL37AP8A6NKH3 93 aa10.95□□□□□ -0.66
CHMP3-207ENST00000485465 SMR3BP02814 79 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-207ENST00000485465 CTAG1AP78358 180 aa10.95□□□□□ -0.66
CHMP3-207ENST00000485465 RYR1P21817 5038 aa10.95□□□□□ -0.66
CHMP3-207ENST00000485465 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
CHMP3-207ENST00000485465 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
CHMP3-207ENST00000485465 FXYD2P54710 66 aa10.93□□□□□ -0.66
CHMP3-207ENST00000485465 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
CHMP3-207ENST00000485465 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
CHMP3-207ENST00000485465 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
CHMP3-207ENST00000485465 IGLV6-57P01721 117 aa10.92□□□□□ -0.66
CHMP3-207ENST00000485465 DDTP30046 118 aa10.92□□□□□ -0.66
CHMP3-207ENST00000485465 OR13C6PQ8NH95 151 aa10.92□□□□□ -0.66
CHMP3-207ENST00000485465 HSPG2P98160 4391 aa10.92□□□□□ -0.66
CHMP3-207ENST00000485465 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
CHMP3-207ENST00000485465 A6NJY4 79 aa10.91□□□□□ -0.66
CHMP3-207ENST00000485465 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
CHMP3-207ENST00000485465 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
CHMP3-207ENST00000485465 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.66
CHMP3-207ENST00000485465 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
CHMP3-207ENST00000485465 CFC1P0CG37 223 aa10.9□□□□□ -0.66
CHMP3-207ENST00000485465 TMEM126AQ9H061 195 aa10.9□□□□□ -0.66
CHMP3-207ENST00000485465 A6NDN8 102 aa10.89□□□□□ -0.67
CHMP3-207ENST00000485465 BVES-AS1Q5T3Y7 98 aa10.89□□□□□ -0.67
CHMP3-207ENST00000485465 PSORS1C2Q9UIG4 136 aa10.89□□□□□ -0.67
CHMP3-207ENST00000485465 KCNQ1DNQ9H478 68 aa10.88□□□□□ -0.67
CHMP3-207ENST00000485465 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
CHMP3-207ENST00000485465 M0R143 59 aa10.87□□□□□ -0.67
CHMP3-207ENST00000485465 HINT1P49773 126 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-207ENST00000485465 PRYO14603 147 aa10.86□□□□□ -0.67
CHMP3-207ENST00000485465 RAB37Q96AX2 223 aa10.86□□□□□ -0.67
CHMP3-207ENST00000485465 TRAV23DV6A0A075B6W5 121 aa10.85□□□□□ -0.67
CHMP3-207ENST00000485465 RPL37AP61513 92 aaKnown RBP10.85□□□□□ -0.67
CHMP3-207ENST00000485465 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
CHMP3-207ENST00000485465 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
CHMP3-207ENST00000485465 CBY1Q9Y3M2 126 aa10.85□□□□□ -0.67
CHMP3-207ENST00000485465 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
CHMP3-207ENST00000485465 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms