RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 PFDN5Q99471 154 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 ARL2-SNX15V9GYD0 113 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 MARF1Q9Y4F3 1742 aaKnown RBP-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 CSMD1Q96PZ7 3565 aa-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 LOC100130705A0A1B0GUX0 176 aa-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 C9orf92A6NGG3 77 aa-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 C9orf153Q5TBE3 101 aa-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 SNRNP25Q9BV90 132 aaKnown RBP-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 EHBP1L1Q8N3D4 1523 aa-1.46□□□□□ -2.64
SFPQ-209ENST00000485454 REV3LO60673 3130 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 PDCD11Q14690 1871 aaKnown RBP-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 A0A1B0GWA3 101 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 LELP1Q5T871 98 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 CDKN2A-AS1Q9UH64 79 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 DNAH11Q96DT5 4516 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 NUP188Q5SRE5 1749 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 KIAA1551Q9HCM1 1747 aa-1.47□□□□□ -2.64
SFPQ-209ENST00000485454 CICQ96RK0 1608 aaPredicted RBP-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 EDC4Q6P2E9 1401 aaKnown RBP-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 CEP250Q9BV73 2442 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 PLEKHH2Q8IVE3 1493 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 DNAH17Q9UFH2 4485 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 TRAV30A0A087WSZ9 112 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 SAA2P0DJI9 122 aaPredicted RBP-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 MT1GP13640 62 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 C5orf38Q86SI9 138 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 LCN9Q8WX39 176 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 MRPL34Q9BQ48 92 aaKnown RBP-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 SHROOM2Q13796 1616 aa-1.48□□□□□ -2.65
SFPQ-209ENST00000485454 LRRC37AA6NMS7 1700 aa-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 A0A1B0GU69 56 aa-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 ARPC4P59998 168 aa-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 Q56UQ5 140 aa-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 HEPN1Q6WQI6 88 aa-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 ANP32BQ92688 251 aaKnown RBP-1.49□□□□□ -2.65
SFPQ-209ENST00000485454 ADGRL2O95490 1459 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 MRC2Q9UBG0 1479 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 DIP2CQ9Y2E4 1556 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 MT1FP04733 61 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 COX6CP09669 75 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 HIGD1BQ9P298 99 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 PAIP2BQ9ULR5 123 aaKnown RBP-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 CEP152O94986 1710 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 SPEGQ15772 3267 aa-1.5□□□□□ -2.65
SFPQ-209ENST00000485454 DCHS1Q96JQ0 3298 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 F6UZH7 168 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 APOC2P02655 101 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 SNCAP37840 140 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 DR1Q01658 176 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 SMIM21Q3B7S5 101 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 WFDC13Q8IUB5 93 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 CLIP1P30622 1438 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 NCOA3Q9Y6Q9 1424 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 NLRP1Q9C000 1473 aa-1.51□□□□□ -2.65
SFPQ-209ENST00000485454 ANKRD36A6QL64 1941 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 MIF4GDA9UHW6 222 aaKnown RBP-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 TRAPPC2P0DI81 140 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 TRAPPC2BP0DI82 140 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 LINC00474Q9P2X8 69 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 ANKRD50Q9ULJ7 1429 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 SCN7AQ01118 1682 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 PHLPP1O60346 1717 aa-1.52□□□□□ -2.65
SFPQ-209ENST00000485454 DMDP11532 3685 aa-1.53□□□□□ -2.65
SFPQ-209ENST00000485454 FAM223BA6NKX1 122 aa-1.53□□□□□ -2.65
SFPQ-209ENST00000485454 NAIPQ13075 1403 aa-1.53□□□□□ -2.65
SFPQ-209ENST00000485454 CATR1Q13166 79 aa-1.53□□□□□ -2.65
SFPQ-209ENST00000485454 C6orf201Q7Z4U5 140 aa-1.53□□□□□ -2.65
SFPQ-209ENST00000485454 FRYQ5TBA9 3013 aa-1.54□□□□□ -2.66
SFPQ-209ENST00000485454 MEIG1Q5JSS6 88 aa-1.54□□□□□ -2.66
SFPQ-209ENST00000485454 UBE2L5PA0A1B0GUS4 154 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 ATP5EP56381 51 aaPredicted RBP-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 SELENOWP63302 87 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 UBE2L3P68036 154 aaKnown RBP-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 C12orf57Q99622 126 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 MANBALQ9NQG1 85 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 PRO1854Q9UHT4 67 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 EP400Q96L91 3159 aa-1.55□□□□□ -2.66
SFPQ-209ENST00000485454 A2ML1A8K2U0 1454 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 UNC80Q8N2C7 3258 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 BCORQ6W2J9 1755 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 A0A0G2JND7 137 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 SPTY2D1-AS1A0A0U1RR47 76 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 FAM25AB3EWG3 89 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 FAM25CB3EWG5 89 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 FAM25GB3EWG6 89 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 H0YAA0 97 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 H3BQF6 201 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 GNG11P61952 73 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 PP6455Q8WZ26 134 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 MAPKBP1O60336 1514 aa-1.56□□□□□ -2.66
SFPQ-209ENST00000485454 FGF7P21781 194 aa-1.57□□□□□ -2.66
SFPQ-209ENST00000485454 Q0VG73 95 aa-1.57□□□□□ -2.66
SFPQ-209ENST00000485454 RGPD2P0DJD1 1756 aa-1.57□□□□□ -2.66
SFPQ-209ENST00000485454 C5orf42Q9H799 3197 aa-1.57□□□□□ -2.66
SFPQ-209ENST00000485454 ROBO1Q9Y6N7 1651 aa-1.58□□□□□ -2.66
SFPQ-209ENST00000485454 KTN1Q86UP2 1357 aaKnown RBP-1.58□□□□□ -2.66
SFPQ-209ENST00000485454 K7EP34 96 aa-1.58□□□□□ -2.66
SFPQ-209ENST00000485454 SMR3BP02814 79 aaPredicted RBP-1.58□□□□□ -2.66
SFPQ-209ENST00000485454 VAMP8Q9BV40 100 aa-1.58□□□□□ -2.66
SFPQ-209ENST00000485454 TOP2BQ02880 1626 aa-1.58□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms