RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 PTTG1IPP53801 180 aa13.96□□□□□ -0.18
NECAB3-211ENST00000485399 SRSF9Q13242 221 aaKnown RBP eCLIP13.96□□□□□ -0.187e-7■■■■□ 19.4
NECAB3-211ENST00000485399 SND1-IT1Q9HBX3 110 aa13.96□□□□□ -0.18
NECAB3-211ENST00000485399 A0A096LNI7 61 aa13.95□□□□□ -0.18
NECAB3-211ENST00000485399 HNRNPA3P51991 378 aaKnown RBP13.94□□□□□ -0.18
NECAB3-211ENST00000485399 COPS9Q8WXC6 57 aa13.94□□□□□ -0.18
NECAB3-211ENST00000485399 LINC00474Q9P2X8 69 aa13.94□□□□□ -0.18
NECAB3-211ENST00000485399 IGKV2-24A0A0C4DH68 120 aa13.93□□□□□ -0.18
NECAB3-211ENST00000485399 IFITM1P13164 125 aa13.93□□□□□ -0.18
NECAB3-211ENST00000485399 XAGE1AQ9HD64 81 aa13.93□□□□□ -0.18
NECAB3-211ENST00000485399 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
NECAB3-211ENST00000485399 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
NECAB3-211ENST00000485399 LOC107984156A0A0G2JMH3 177 aa13.9□□□□□ -0.18
NECAB3-211ENST00000485399 NPC2P61916 151 aa13.9□□□□□ -0.18
NECAB3-211ENST00000485399 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.18
NECAB3-211ENST00000485399 ARL17AQ8IVW1 177 aa13.9□□□□□ -0.18
NECAB3-211ENST00000485399 TAL2Q16559 108 aa13.89□□□□□ -0.19
NECAB3-211ENST00000485399 CHTF8P0CG12 524 aa13.88□□□□□ -0.19
NECAB3-211ENST00000485399 KRTAP10-1P60331 282 aa13.88□□□□□ -0.19
NECAB3-211ENST00000485399 MUSTN1Q8IVN3 82 aa13.88□□□□□ -0.19
NECAB3-211ENST00000485399 PPDPFQ9H3Y8 114 aa13.88□□□□□ -0.19
NECAB3-211ENST00000485399 SOSTDC1Q6X4U4 206 aa13.87□□□□□ -0.19
NECAB3-211ENST00000485399 SPACA4Q8TDM5 124 aa13.86□□□□□ -0.19
NECAB3-211ENST00000485399 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
NECAB3-211ENST00000485399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.86□□□□□ -0.19
NECAB3-211ENST00000485399 HSD52Q0P140 79 aa13.85□□□□□ -0.19
NECAB3-211ENST00000485399 PLA2G2DQ9UNK4 145 aa13.85□□□□□ -0.19
NECAB3-211ENST00000485399 EIF4EBP3O60516 100 aaPredicted RBP13.84□□□□□ -0.19
NECAB3-211ENST00000485399 RPL24P83731 157 aaKnown RBP13.84□□□□□ -0.19
NECAB3-211ENST00000485399 Q8N1X5 172 aa13.84□□□□□ -0.19
NECAB3-211ENST00000485399 HERC1Q15751 4861 aa13.84□□□□□ -0.19
NECAB3-211ENST00000485399 PANO1I0J062 215 aa13.83□□□□□ -0.19
NECAB3-211ENST00000485399 CEND1Q8N111 149 aa13.83□□□□□ -0.2
NECAB3-211ENST00000485399 NDUFC2O95298 119 aa13.82□□□□□ -0.2
NECAB3-211ENST00000485399 DDTP30046 118 aa13.82□□□□□ -0.2
NECAB3-211ENST00000485399 Q6ZSA8 131 aa13.82□□□□□ -0.2
NECAB3-211ENST00000485399 FAM168BA1KXE4 195 aa13.81□□□□□ -0.2
NECAB3-211ENST00000485399 CTAG1AP78358 180 aa13.81□□□□□ -0.2
NECAB3-211ENST00000485399 FAM30AQ9NZY2 134 aa13.8□□□□□ -0.2
NECAB3-211ENST00000485399 FAT1Q14517 4588 aa13.79□□□□□ -0.2
NECAB3-211ENST00000485399 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
NECAB3-211ENST00000485399 VPREB1P12018 145 aa13.79□□□□□ -0.2
NECAB3-211ENST00000485399 SERTAD4-AS1Q5TG53 156 aa13.79□□□□□ -0.2
NECAB3-211ENST00000485399 FAM19A5Q7Z5A7 132 aaPredicted RBP13.79□□□□□ -0.2
NECAB3-211ENST00000485399 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
NECAB3-211ENST00000485399 A0A087WYN8 130 aa13.78□□□□□ -0.2
NECAB3-211ENST00000485399 Q8NDZ9 215 aa13.78□□□□□ -0.2
NECAB3-211ENST00000485399 A4D1N5 150 aa13.77□□□□□ -0.21
NECAB3-211ENST00000485399 NKAPP1Q8N9T2 125 aa13.77□□□□□ -0.21
NECAB3-211ENST00000485399 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
NECAB3-211ENST00000485399 A6NJY4 79 aa13.76□□□□□ -0.21
NECAB3-211ENST00000485399 PLAC8Q9NZF1 115 aa13.76□□□□□ -0.21
NECAB3-211ENST00000485399 EPM2AB3EWF7 344 aa13.75□□□□□ -0.21
NECAB3-211ENST00000485399 KRTAP7-1Q8IUC3 87 aa13.75□□□□□ -0.21
NECAB3-211ENST00000485399 C22orf24Q9Y442 160 aa13.75□□□□□ -0.21
NECAB3-211ENST00000485399 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
NECAB3-211ENST00000485399 M0R143 59 aa13.74□□□□□ -0.21
NECAB3-211ENST00000485399 PRR3P79522 188 aaKnown RBP13.74□□□□□ -0.21
NECAB3-211ENST00000485399 M0R378 163 aa13.73□□□□□ -0.21
NECAB3-211ENST00000485399 NCR3O14931 201 aa13.73□□□□□ -0.21
NECAB3-211ENST00000485399 FXYD2P54710 66 aa13.73□□□□□ -0.21
NECAB3-211ENST00000485399 M0QXV9 152 aa13.72□□□□□ -0.21
NECAB3-211ENST00000485399 IGKV2-28A0A075B6P5 120 aa13.71□□□□□ -0.21
NECAB3-211ENST00000485399 IGKV2D-28P01615 120 aa13.71□□□□□ -0.21
NECAB3-211ENST00000485399 LBHQ53QV2 105 aaPredicted RBP13.71□□□□□ -0.21
NECAB3-211ENST00000485399 BVES-AS1Q5T3Y7 98 aa13.71□□□□□ -0.21
NECAB3-211ENST00000485399 CIRBP-AS1Q8TBR5 109 aa13.71□□□□□ -0.21
NECAB3-211ENST00000485399 PCP4L1A6NKN8 68 aa13.71□□□□□ -0.22
NECAB3-211ENST00000485399 HINT1P49773 126 aaPredicted RBP13.71□□□□□ -0.22
NECAB3-211ENST00000485399 SCXQ7RTU7 201 aa13.71□□□□□ -0.22
NECAB3-211ENST00000485399 MRPL55Q7Z7F7 128 aaKnown RBP13.71□□□□□ -0.22
NECAB3-211ENST00000485399 VPS13BQ7Z7G8 4022 aa13.7□□□□□ -0.22
NECAB3-211ENST00000485399 DNAH8Q96JB1 4490 aa13.69□□□□□ -0.22
NECAB3-211ENST00000485399 C7orf33Q8WU49 177 aa13.69□□□□□ -0.22
NECAB3-211ENST00000485399 TRAV13-2A0A0B4J235 113 aa13.68□□□□□ -0.22
NECAB3-211ENST00000485399 S100A7L2Q5SY68 101 aa13.68□□□□□ -0.22
NECAB3-211ENST00000485399 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
NECAB3-211ENST00000485399 LINC00167Q96N53 147 aa13.68□□□□□ -0.22
NECAB3-211ENST00000485399 CFC1BP0CG36 223 aa13.67□□□□□ -0.22
NECAB3-211ENST00000485399 CFC1P0CG37 223 aa13.67□□□□□ -0.22
NECAB3-211ENST00000485399 MYCBP2O75592 4640 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 A0A0B4J2C4 111 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 GAGE10A6NGK3 116 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 OR13C6PQ8NH95 151 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
NECAB3-211ENST00000485399 TMEM126AQ9H061 195 aa13.65□□□□□ -0.22
NECAB3-211ENST00000485399 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
NECAB3-211ENST00000485399 A6NDN8 102 aa13.64□□□□□ -0.23
NECAB3-211ENST00000485399 XGP55808 180 aa13.63□□□□□ -0.23
NECAB3-211ENST00000485399 UBE2BP63146 152 aa13.63□□□□□ -0.23
NECAB3-211ENST00000485399 HAMPP81172 84 aa13.63□□□□□ -0.23
NECAB3-211ENST00000485399 IGLV6-57P01721 117 aa13.62□□□□□ -0.23
NECAB3-211ENST00000485399 IGLV1-50A0A075B6I6 118 aa13.61□□□□□ -0.23
NECAB3-211ENST00000485399 TRBV10-3A0A0K0K1G6 114 aa13.61□□□□□ -0.23
NECAB3-211ENST00000485399 A0A1B0GWB2 263 aa13.61□□□□□ -0.23
NECAB3-211ENST00000485399 RPL37AP8A6NKH3 93 aa13.61□□□□□ -0.23
NECAB3-211ENST00000485399 CBY1Q9Y3M2 126 aa13.61□□□□□ -0.23
NECAB3-211ENST00000485399 BATFQ16520 125 aa13.6□□□□□ -0.23
NECAB3-211ENST00000485399 PRO1854Q9UHT4 67 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms