RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TMEM223A0PJW6 202 aa7.83□□□□□ -1.16
HDAC6-227ENST00000485102 NMUP48645 174 aa7.83□□□□□ -1.16
HDAC6-227ENST00000485102 HSBP1L1C9JCN9 74 aa7.82□□□□□ -1.16
HDAC6-227ENST00000485102 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
HDAC6-227ENST00000485102 HERV-K104P63124 156 aa7.82□□□□□ -1.16
HDAC6-227ENST00000485102 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
HDAC6-227ENST00000485102 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
HDAC6-227ENST00000485102 COX17Q14061 63 aa7.81□□□□□ -1.16
HDAC6-227ENST00000485102 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
HDAC6-227ENST00000485102 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
HDAC6-227ENST00000485102 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
HDAC6-227ENST00000485102 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
HDAC6-227ENST00000485102 LEPROTO15243 131 aa7.8□□□□□ -1.16
HDAC6-227ENST00000485102 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
HDAC6-227ENST00000485102 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
HDAC6-227ENST00000485102 E9PLD3 99 aa7.79□□□□□ -1.16
HDAC6-227ENST00000485102 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
HDAC6-227ENST00000485102 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
HDAC6-227ENST00000485102 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
HDAC6-227ENST00000485102 GAGE2EQ4V326 116 aa7.77□□□□□ -1.17
HDAC6-227ENST00000485102 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-227ENST00000485102 GAGE2DQ9UEU5 116 aa7.77□□□□□ -1.17
HDAC6-227ENST00000485102 J3QQQ9 107 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 M0QXV9 152 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 PRR4Q16378 134 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 PMCHL2Q9BQD1 86 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
HDAC6-227ENST00000485102 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
HDAC6-227ENST00000485102 UBE2BP63146 152 aa7.75□□□□□ -1.17
HDAC6-227ENST00000485102 COPS9Q8WXC6 57 aa7.75□□□□□ -1.17
HDAC6-227ENST00000485102 ZNF861PO60384 105 aa7.74□□□□□ -1.17
HDAC6-227ENST00000485102 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
HDAC6-227ENST00000485102 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
HDAC6-227ENST00000485102 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
HDAC6-227ENST00000485102 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-227ENST00000485102 ERG28Q9UKR5 140 aa7.73□□□□□ -1.17
HDAC6-227ENST00000485102 MEIG1Q5JSS6 88 aa7.72□□□□□ -1.17
HDAC6-227ENST00000485102 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
HDAC6-227ENST00000485102 JOSD1Q15040 202 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-227ENST00000485102 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-227ENST00000485102 LINC00158P58513 81 aa7.7□□□□□ -1.18
HDAC6-227ENST00000485102 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
HDAC6-227ENST00000485102 TIMM17BO60830 172 aa7.69□□□□□ -1.18
HDAC6-227ENST00000485102 Q6ZVH6 145 aa7.69□□□□□ -1.18
HDAC6-227ENST00000485102 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
HDAC6-227ENST00000485102 ZNF815PA8K554 130 aa7.68□□□□□ -1.18
HDAC6-227ENST00000485102 PFN2P35080 140 aa7.68□□□□□ -1.18
HDAC6-227ENST00000485102 LBHQ53QV2 105 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-227ENST00000485102 SCGB1D4Q6XE38 83 aa7.68□□□□□ -1.18
HDAC6-227ENST00000485102 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
HDAC6-227ENST00000485102 C22orf24Q9Y442 160 aa7.68□□□□□ -1.18
HDAC6-227ENST00000485102 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
HDAC6-227ENST00000485102 S100A12P80511 92 aa7.67□□□□□ -1.18
HDAC6-227ENST00000485102 VAMP8Q9BV40 100 aa7.67□□□□□ -1.18
HDAC6-227ENST00000485102 A0A0J9YXY3 114 aa7.66□□□□□ -1.18
HDAC6-227ENST00000485102 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
HDAC6-227ENST00000485102 A0A087X002 238 aa7.65□□□□□ -1.18
HDAC6-227ENST00000485102 TSPAN13O95857 204 aa7.65□□□□□ -1.18
HDAC6-227ENST00000485102 CRYGAP11844 174 aa7.65□□□□□ -1.18
HDAC6-227ENST00000485102 RPL28P46779 137 aaKnown RBP7.65□□□□□ -1.18
HDAC6-227ENST00000485102 PPDPFQ9H3Y8 114 aa7.65□□□□□ -1.18
HDAC6-227ENST00000485102 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
HDAC6-227ENST00000485102 BCE1O60756 84 aa7.64□□□□□ -1.19
HDAC6-227ENST00000485102 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
HDAC6-227ENST00000485102 BOD1L2Q8IYS8 172 aa7.64□□□□□ -1.19
HDAC6-227ENST00000485102 IGKV2D-26A0A0A0MRZ7 120 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 LOC107984156A0A0G2JMH3 177 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 DLEU1O43261 78 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 SMIM13P0DJ93 91 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 IFITM1P13164 125 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 CTAG1AP78358 180 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 ANKRD39Q53RE8 183 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 MRPL55Q7Z7F7 128 aaKnown RBP7.63□□□□□ -1.19
HDAC6-227ENST00000485102 ARL17AQ8IVW1 177 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 SND1-IT1Q9HBX3 110 aa7.63□□□□□ -1.19
HDAC6-227ENST00000485102 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
HDAC6-227ENST00000485102 XAGE1AQ9HD64 81 aa7.62□□□□□ -1.19
HDAC6-227ENST00000485102 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
HDAC6-227ENST00000485102 NDUFC2O95298 119 aa7.61□□□□□ -1.19
HDAC6-227ENST00000485102 COX8AP10176 69 aa7.61□□□□□ -1.19
HDAC6-227ENST00000485102 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
HDAC6-227ENST00000485102 MUC17Q685J3 4493 aa7.61□□□□□ -1.19
HDAC6-227ENST00000485102 SMIM6P0DI80 62 aa7.6□□□□□ -1.19
HDAC6-227ENST00000485102 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
HDAC6-227ENST00000485102 SPANXDQ9BXN6 97 aa7.6□□□□□ -1.19
HDAC6-227ENST00000485102 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
HDAC6-227ENST00000485102 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 KRTAP13-1Q8IUC0 172 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 PAM16Q9Y3D7 125 aa7.59□□□□□ -1.19
HDAC6-227ENST00000485102 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
HDAC6-227ENST00000485102 A0A0U1RRA0 63 aa7.58□□□□□ -1.2
HDAC6-227ENST00000485102 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
HDAC6-227ENST00000485102 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
HDAC6-227ENST00000485102 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms