RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
CNKSR1-208ENST00000484874 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
CNKSR1-208ENST00000484874 C20orf202A1L168 122 aa11.16□□□□□ -0.62
CNKSR1-208ENST00000484874 S100A2P29034 98 aa11.16□□□□□ -0.62
CNKSR1-208ENST00000484874 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-208ENST00000484874 HIST1H2BLQ99880 126 aa11.16□□□□□ -0.62
CNKSR1-208ENST00000484874 SMIM13P0DJ93 91 aa11.15□□□□□ -0.62
CNKSR1-208ENST00000484874 RPL24P83731 157 aaKnown RBP11.15□□□□□ -0.62
CNKSR1-208ENST00000484874 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
CNKSR1-208ENST00000484874 KRTAP11-1Q8IUC1 163 aa11.15□□□□□ -0.62
CNKSR1-208ENST00000484874 UBE2BP63146 152 aa11.14□□□□□ -0.63
CNKSR1-208ENST00000484874 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
CNKSR1-208ENST00000484874 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
CNKSR1-208ENST00000484874 OXTP01178 125 aa11.13□□□□□ -0.63
CNKSR1-208ENST00000484874 VPREB1P12018 145 aa11.13□□□□□ -0.63
CNKSR1-208ENST00000484874 C1orf137Q5JT78 98 aa11.13□□□□□ -0.63
CNKSR1-208ENST00000484874 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
CNKSR1-208ENST00000484874 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
CNKSR1-208ENST00000484874 C5orf52A6NGY3 159 aa11.12□□□□□ -0.63
CNKSR1-208ENST00000484874 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
CNKSR1-208ENST00000484874 MIR7-3HGQ8N6C7 128 aa11.12□□□□□ -0.63
CNKSR1-208ENST00000484874 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
CNKSR1-208ENST00000484874 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
CNKSR1-208ENST00000484874 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
CNKSR1-208ENST00000484874 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
CNKSR1-208ENST00000484874 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
CNKSR1-208ENST00000484874 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
CNKSR1-208ENST00000484874 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
CNKSR1-208ENST00000484874 IGKV2D-26A0A0A0MRZ7 120 aa11.07□□□□□ -0.64
CNKSR1-208ENST00000484874 Q8NDZ9 215 aa11.07□□□□□ -0.64
CNKSR1-208ENST00000484874 RPL37AP8A6NKH3 93 aa11.06□□□□□ -0.64
CNKSR1-208ENST00000484874 IGLV1-50A0A075B6I6 118 aa11.05□□□□□ -0.64
CNKSR1-208ENST00000484874 BOD1L2Q8IYS8 172 aa11.05□□□□□ -0.64
CNKSR1-208ENST00000484874 GAGE10A6NGK3 116 aa11.04□□□□□ -0.64
CNKSR1-208ENST00000484874 M0R378 163 aa11.04□□□□□ -0.64
CNKSR1-208ENST00000484874 TIMM17BO60830 172 aa11.04□□□□□ -0.64
CNKSR1-208ENST00000484874 ATOH7Q8N100 152 aa11.04□□□□□ -0.64
CNKSR1-208ENST00000484874 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
CNKSR1-208ENST00000484874 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
CNKSR1-208ENST00000484874 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
CNKSR1-208ENST00000484874 J3QL48 77 aa11.02□□□□□ -0.65
CNKSR1-208ENST00000484874 BCE1O60756 84 aa11.02□□□□□ -0.65
CNKSR1-208ENST00000484874 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.65
CNKSR1-208ENST00000484874 DAND5Q8N907 189 aa11.02□□□□□ -0.65
CNKSR1-208ENST00000484874 DIRC1Q969H9 104 aa11.02□□□□□ -0.65
CNKSR1-208ENST00000484874 ZNF861PO60384 105 aa11.01□□□□□ -0.65
CNKSR1-208ENST00000484874 LITAFQ99732 161 aa11.01□□□□□ -0.65
CNKSR1-208ENST00000484874 LRP1Q07954 4544 aaKnown RBP11.01□□□□□ -0.65
CNKSR1-208ENST00000484874 NDUFC2O95298 119 aa11□□□□□ -0.65
CNKSR1-208ENST00000484874 LINC01600Q96MT4 127 aa11□□□□□ -0.65
CNKSR1-208ENST00000484874 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
CNKSR1-208ENST00000484874 IGKV2-28A0A075B6P5 120 aa10.99□□□□□ -0.65
CNKSR1-208ENST00000484874 IGKV2D-28P01615 120 aa10.99□□□□□ -0.65
CNKSR1-208ENST00000484874 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
CNKSR1-208ENST00000484874 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
CNKSR1-208ENST00000484874 TRBV10-2A0A0K0K1G8 114 aa10.98□□□□□ -0.65
CNKSR1-208ENST00000484874 H0Y9J4 135 aa10.98□□□□□ -0.65
CNKSR1-208ENST00000484874 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
CNKSR1-208ENST00000484874 RPL28P46779 137 aaKnown RBP10.97□□□□□ -0.65
CNKSR1-208ENST00000484874 FAT3Q8TDW7 4589 aa10.96□□□□□ -0.65
CNKSR1-208ENST00000484874 SCGB1D1O95968 90 aa10.96□□□□□ -0.65
CNKSR1-208ENST00000484874 SOSTDC1Q6X4U4 206 aa10.96□□□□□ -0.65
CNKSR1-208ENST00000484874 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
CNKSR1-208ENST00000484874 KRTAP13-1Q8IUC0 172 aa10.95□□□□□ -0.66
CNKSR1-208ENST00000484874 LINC00308Q8TCZ7 52 aa10.95□□□□□ -0.66
CNKSR1-208ENST00000484874 KCNQ1DNQ9H478 68 aa10.95□□□□□ -0.66
CNKSR1-208ENST00000484874 NCR3O14931 201 aa10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 MT1HL1P0DM35 61 aa10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 SCGB1D4Q6XE38 83 aa10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
CNKSR1-208ENST00000484874 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
CNKSR1-208ENST00000484874 Q6ZVH6 145 aa10.93□□□□□ -0.66
CNKSR1-208ENST00000484874 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
CNKSR1-208ENST00000484874 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
CNKSR1-208ENST00000484874 SPANXCQ9NY87 97 aa10.93□□□□□ -0.66
CNKSR1-208ENST00000484874 PRYO14603 147 aa10.92□□□□□ -0.66
CNKSR1-208ENST00000484874 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
CNKSR1-208ENST00000484874 TRBV10-3A0A0K0K1G6 114 aa10.91□□□□□ -0.66
CNKSR1-208ENST00000484874 UBE2AP49459 152 aa10.91□□□□□ -0.66
CNKSR1-208ENST00000484874 IFITM1P13164 125 aa10.9□□□□□ -0.66
CNKSR1-208ENST00000484874 SPRR1AP35321 89 aa10.9□□□□□ -0.66
CNKSR1-208ENST00000484874 NPC2P61916 151 aa10.9□□□□□ -0.66
CNKSR1-208ENST00000484874 S100A12P80511 92 aa10.9□□□□□ -0.66
CNKSR1-208ENST00000484874 COPS9Q8WXC6 57 aa10.9□□□□□ -0.66
CNKSR1-208ENST00000484874 IGLV6-57P01721 117 aa10.89□□□□□ -0.67
CNKSR1-208ENST00000484874 DDTP30046 118 aa10.89□□□□□ -0.67
CNKSR1-208ENST00000484874 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
CNKSR1-208ENST00000484874 LINC00337Q8N6G1 96 aa10.89□□□□□ -0.67
CNKSR1-208ENST00000484874 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
CNKSR1-208ENST00000484874 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
CNKSR1-208ENST00000484874 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
CNKSR1-208ENST00000484874 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
CNKSR1-208ENST00000484874 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
CNKSR1-208ENST00000484874 CBY1Q9Y3M2 126 aa10.86□□□□□ -0.67
CNKSR1-208ENST00000484874 PRLHP81277 87 aa10.84□□□□□ -0.67
CNKSR1-208ENST00000484874 DLEU1O43261 78 aa10.83□□□□□ -0.68
CNKSR1-208ENST00000484874 COX8AP10176 69 aa10.83□□□□□ -0.68
CNKSR1-208ENST00000484874 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms