RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 PKD1P98161 4303 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 IGLV5-52A0A0A0MRZ9 124 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 SLPIP03973 132 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 IFITM1P13164 125 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 SPANXDQ9BXN6 97 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 SPANXCQ9NY87 97 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 PLA2G2DQ9UNK4 145 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 HECTD4Q9Y4D8 3996 aa4.22□□□□□ -1.73
PDZRN3-209ENST00000484487 A0A0U1RRA0 63 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 DDTP30046 118 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 PTTG1IPP53801 180 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 HSD52Q0P140 79 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 C9orf116Q5BN46 136 aaPredicted RBP4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 C2orf91Q6ZV80 131 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 TP73-AS1Q9UF72 201 aa4.21□□□□□ -1.74
PDZRN3-209ENST00000484487 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 LITAFQ99732 161 aa4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
PDZRN3-209ENST00000484487 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 C16orf90A8MZG2 172 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 M0R143 59 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 GAGE2EQ4V326 116 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 Q6ZRP5 223 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 LINC00308Q8TCZ7 52 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 GAGE2DQ9UEU5 116 aa4.19□□□□□ -1.74
PDZRN3-209ENST00000484487 NDUFC2O95298 119 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 PLA2G1BP04054 148 aaKnown RBP4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 CTAG1AP78358 180 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 SDIM1Q6ZPB5 146 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 CEND1Q8N111 149 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 DAND5Q8N907 189 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
PDZRN3-209ENST00000484487 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 IGKV2-24A0A0C4DH68 120 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 NPC2P61916 151 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 DPH3Q96FX2 82 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 XAGE1AQ9HD64 81 aa4.17□□□□□ -1.74
PDZRN3-209ENST00000484487 A0A096LNI7 61 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 KRTAP10-2P60368 255 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 NKAPP1Q8N9T2 125 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 CBY1Q9Y3M2 126 aa4.16□□□□□ -1.74
PDZRN3-209ENST00000484487 IGLV5-37A0A075B6J1 123 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 A4D1N5 150 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 A6NDN8 102 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 HINT1P49773 126 aaPredicted RBP4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 LINC01620Q4KN68 170 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 BVES-AS1Q5T3Y7 98 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
PDZRN3-209ENST00000484487 TRAV13-2A0A0B4J235 113 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 A0A0B4J2C4 111 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 M0R378 163 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 VPREB1P12018 145 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 FUSP35637 526 aaKnown RBP eCLIP4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 SPACA4Q8TDM5 124 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 RAB37Q96AX2 223 aa4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
PDZRN3-209ENST00000484487 CHTF8P0CG12 524 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 FXYD2P54710 66 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 FAM19A5Q7Z5A7 132 aaPredicted RBP4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 PRO1854Q9UHT4 67 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
PDZRN3-209ENST00000484487 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 A0A087WYN8 130 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 M0QXV9 152 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 NCR3O14931 201 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 CFC1P0CG37 223 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 BATFQ16520 125 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 Q6ZSA8 131 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 C22orf24Q9Y442 160 aa4.12□□□□□ -1.75
PDZRN3-209ENST00000484487 IGKV2-28A0A075B6P5 120 aa4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 A0A1W2PNN7 141 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms