RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 A0A087WYN8 130 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 DLEU1O43261 78 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 COX8AP10176 69 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 PFN2P35080 140 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 SPATA45Q537H7 98 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 MEIG1Q5JSS6 88 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 BOD1L2Q8IYS8 172 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 XAGE1AQ9HD64 81 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 PLA2G2DQ9UNK4 145 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
NCL-209ENST00000484328 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 MIR7-3HGQ8N6C7 128 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 SPANXDQ9BXN6 97 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 SPANXCQ9NY87 97 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 TP73-AS1Q9UF72 201 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
NCL-209ENST00000484328 FAM168BA1KXE4 195 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 TMEM238C9JI98 176 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 VPREB1P12018 145 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 LINC00158P58513 81 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 SCGB1D4Q6XE38 83 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 Q8NDZ9 215 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 KRTAP17-1Q9BYP8 105 aa4.04□□□□□ -1.76
NCL-209ENST00000484328 SPANXB1Q9NS25 103 aaPredicted RBP4.04□□□□□ -1.76
NCL-209ENST00000484328 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 EIF4EBP3O60516 100 aaPredicted RBP4.03□□□□□ -1.76
NCL-209ENST00000484328 HAMPP81172 84 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 SLC25A34Q6PIV7 304 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 C2orf91Q6ZV80 131 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 Q6ZVH6 145 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 DAND5Q8N907 189 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 LINC00308Q8TCZ7 52 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 RYR1P21817 5038 aa4.03□□□□□ -1.76
NCL-209ENST00000484328 M0QXV9 152 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 NDUFC2O95298 119 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 S100A12P80511 92 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
NCL-209ENST00000484328 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 HIGD1BQ9P298 99 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 HSPG2P98160 4391 aa4.02□□□□□ -1.77
NCL-209ENST00000484328 IFITM1P13164 125 aa4.01□□□□□ -1.77
NCL-209ENST00000484328 RPL24P83731 157 aaKnown RBP4.01□□□□□ -1.77
NCL-209ENST00000484328 MIEN1Q9BRT3 115 aa4.01□□□□□ -1.77
NCL-209ENST00000484328 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
NCL-209ENST00000484328 HERC2O95714 4834 aa4□□□□□ -1.77
NCL-209ENST00000484328 TRBV10-2A0A0K0K1G8 114 aa4□□□□□ -1.77
NCL-209ENST00000484328 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
NCL-209ENST00000484328 PHF5AQ7RTV0 110 aaKnown RBP4□□□□□ -1.77
NCL-209ENST00000484328 MRPL55Q7Z7F7 128 aaKnown RBP4□□□□□ -1.77
NCL-209ENST00000484328 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
NCL-209ENST00000484328 LINC00518Q8N0U6 118 aa4□□□□□ -1.77
NCL-209ENST00000484328 C7orf33Q8WU49 177 aa4□□□□□ -1.77
NCL-209ENST00000484328 COPS9Q8WXC6 57 aa4□□□□□ -1.77
NCL-209ENST00000484328 C12orf57Q99622 126 aa4□□□□□ -1.77
NCL-209ENST00000484328 UQCR10Q9UDW1 63 aa4□□□□□ -1.77
NCL-209ENST00000484328 C22orf24Q9Y442 160 aa4□□□□□ -1.77
NCL-209ENST00000484328 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 NPC2P61916 151 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 LBHQ53QV2 105 aaPredicted RBP3.99□□□□□ -1.77
NCL-209ENST00000484328 Q8N1X5 172 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 NKAPP1Q8N9T2 125 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
NCL-209ENST00000484328 IGLV1-50A0A075B6I6 118 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 M0R378 163 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 NCR3O14931 201 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
NCL-209ENST00000484328 TAL2Q16559 108 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 MUSTN1Q8IVN3 82 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
NCL-209ENST00000484328 FAT1Q14517 4588 aa3.97□□□□□ -1.77
NCL-209ENST00000484328 SMR3BP02814 79 aaPredicted RBP3.97□□□□□ -1.77
NCL-209ENST00000484328 HSD52Q0P140 79 aa3.97□□□□□ -1.77
NCL-209ENST00000484328 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.771e-26■■□□□ 14
NCL-209ENST00000484328 HIST1H4GQ99525 98 aa3.97□□□□□ -1.77
NCL-209ENST00000484328 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
NCL-209ENST00000484328 TRBV10-3A0A0K0K1G6 114 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 A4D1N5 150 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 GAGE10A6NGK3 116 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 FAM229AH3BQW9 127 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 SPRR1AP35321 89 aa3.96□□□□□ -1.78
NCL-209ENST00000484328 HNRNPA3P51991 378 aaKnown RBP3.96□□□□□ -1.78
NCL-209ENST00000484328 RPL37AP61513 92 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms