RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TNXBP22105 4242 aa6.19□□□□□ -1.42
CPSF4-213ENST00000484112 LINC00587B1AMM8 73 aa6.19□□□□□ -1.42
CPSF4-213ENST00000484112 DDTP30046 118 aa6.19□□□□□ -1.42
CPSF4-213ENST00000484112 C9orf129Q5T035 196 aaKnown RBP6.19□□□□□ -1.42
CPSF4-213ENST00000484112 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
CPSF4-213ENST00000484112 TP73-AS1Q9UF72 201 aa6.18□□□□□ -1.42
CPSF4-213ENST00000484112 DPM2O94777 84 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 HERV-K104P63124 156 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 LBHQ53QV2 105 aaPredicted RBP6.17□□□□□ -1.42
CPSF4-213ENST00000484112 REG3GQ6UW15 175 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 SPINK6Q6UWN8 80 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 ZNF625Q96I27 306 aaPredicted RBP6.17□□□□□ -1.42
CPSF4-213ENST00000484112 MIEN1Q9BRT3 115 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 PAM16Q9Y3D7 125 aa6.17□□□□□ -1.42
CPSF4-213ENST00000484112 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
CPSF4-213ENST00000484112 M0QXV9 152 aa6.16□□□□□ -1.42
CPSF4-213ENST00000484112 HERVK_113P61574 105 aa6.16□□□□□ -1.42
CPSF4-213ENST00000484112 FAM19A5Q7Z5A7 132 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-213ENST00000484112 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 H0Y8G0 127 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 IGKCP01834 107 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
CPSF4-213ENST00000484112 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 PLEKHB2Q96CS7 222 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 XAGE1AQ9HD64 81 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.42
CPSF4-213ENST00000484112 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 HSBP1L1C9JCN9 74 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 LEPROTO15243 131 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 NMUP48645 174 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 ATOH7Q8N100 152 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
CPSF4-213ENST00000484112 PFN2P35080 140 aa6.13□□□□□ -1.43
CPSF4-213ENST00000484112 UBE2BP63146 152 aa6.13□□□□□ -1.43
CPSF4-213ENST00000484112 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
CPSF4-213ENST00000484112 SRSF9Q13242 221 aaKnown RBP eCLIP6.13□□□□□ -1.43
CPSF4-213ENST00000484112 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
CPSF4-213ENST00000484112 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
CPSF4-213ENST00000484112 C1orf137Q5JT78 98 aa6.12□□□□□ -1.43
CPSF4-213ENST00000484112 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
CPSF4-213ENST00000484112 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
CPSF4-213ENST00000484112 J3QQQ9 107 aa6.11□□□□□ -1.43
CPSF4-213ENST00000484112 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
CPSF4-213ENST00000484112 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
CPSF4-213ENST00000484112 PMCHL2Q9BQD1 86 aa6.11□□□□□ -1.43
CPSF4-213ENST00000484112 E9PLD3 99 aa6.1□□□□□ -1.43
CPSF4-213ENST00000484112 DLEU1O43261 78 aa6.1□□□□□ -1.43
CPSF4-213ENST00000484112 COX8AP10176 69 aa6.1□□□□□ -1.43
CPSF4-213ENST00000484112 LGALS3P17931 250 aaKnown RBP6.1□□□□□ -1.43
CPSF4-213ENST00000484112 LINC00158P58513 81 aa6.1□□□□□ -1.43
CPSF4-213ENST00000484112 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
CPSF4-213ENST00000484112 CTAG1AP78358 180 aa6.09□□□□□ -1.43
CPSF4-213ENST00000484112 SLC25A34Q6PIV7 304 aa6.09□□□□□ -1.43
CPSF4-213ENST00000484112 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
CPSF4-213ENST00000484112 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
CPSF4-213ENST00000484112 VPREB1P12018 145 aa6.08□□□□□ -1.44
CPSF4-213ENST00000484112 ANKRD39Q53RE8 183 aa6.08□□□□□ -1.44
CPSF4-213ENST00000484112 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
CPSF4-213ENST00000484112 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
CPSF4-213ENST00000484112 IGKV2D-26A0A0A0MRZ7 120 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 M0R143 59 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 SMIM13P0DJ93 91 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 TSPEAR-AS2P59090 65 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 LPAP08519 4548 aa6.07□□□□□ -1.44
CPSF4-213ENST00000484112 H0Y9J4 135 aa6.06□□□□□ -1.44
CPSF4-213ENST00000484112 ZNF861PO60384 105 aa6.06□□□□□ -1.44
CPSF4-213ENST00000484112 BCE1O60756 84 aa6.06□□□□□ -1.44
CPSF4-213ENST00000484112 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
CPSF4-213ENST00000484112 SNHG12Q9BXW3 62 aa6.06□□□□□ -1.44
CPSF4-213ENST00000484112 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
CPSF4-213ENST00000484112 M0R378 163 aa6.05□□□□□ -1.44
CPSF4-213ENST00000484112 RPL28P46779 137 aaKnown RBP6.05□□□□□ -1.44
CPSF4-213ENST00000484112 TIMM17BO60830 172 aa6.04□□□□□ -1.44
CPSF4-213ENST00000484112 C2orf91Q6ZV80 131 aa6.04□□□□□ -1.44
CPSF4-213ENST00000484112 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
CPSF4-213ENST00000484112 A0A0J9YXY3 114 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 A0A0U1RRA0 63 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 RPL37AP8A6NKH3 93 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 NDUFC2O95298 119 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 PRR26Q8N8Z3 221 aa6.03□□□□□ -1.44
CPSF4-213ENST00000484112 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
CPSF4-213ENST00000484112 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
CPSF4-213ENST00000484112 IGKV2-28A0A075B6P5 120 aa6.01□□□□□ -1.45
CPSF4-213ENST00000484112 IGKV2D-28P01615 120 aa6.01□□□□□ -1.45
CPSF4-213ENST00000484112 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
CPSF4-213ENST00000484112 SPANXB1Q9NS25 103 aaPredicted RBP6.01□□□□□ -1.45
CPSF4-213ENST00000484112 ZNF815PA8K554 130 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 PRYO14603 147 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 UBE2AP49459 152 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 HSD52Q0P140 79 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 PRR4Q16378 134 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 KRTAP13-1Q8IUC0 172 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms