RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 PRO1933Q9H354 126 aa8.94□□□□□ -0.98
SRSF6-202ENST00000483871 NPC2P61916 151 aa8.94□□□□□ -0.98
SRSF6-202ENST00000483871 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
SRSF6-202ENST00000483871 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
SRSF6-202ENST00000483871 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
SRSF6-202ENST00000483871 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
SRSF6-202ENST00000483871 HSPG2P98160 4391 aa8.93□□□□□ -0.98
SRSF6-202ENST00000483871 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
SRSF6-202ENST00000483871 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
SRSF6-202ENST00000483871 BIRC6Q9NR09 4857 aa8.92□□□□□ -0.98
SRSF6-202ENST00000483871 TIMM17BO60830 172 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 Q8NDZ9 215 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 RYR1P21817 5038 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 DLEU1O43261 78 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 SLC25A34Q6PIV7 304 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 FAM19A5Q7Z5A7 132 aaPredicted RBP8.91□□□□□ -0.98
SRSF6-202ENST00000483871 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
SRSF6-202ENST00000483871 FAT1Q14517 4588 aa8.89□□□□□ -0.99
SRSF6-202ENST00000483871 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
SRSF6-202ENST00000483871 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
SRSF6-202ENST00000483871 PRR3P79522 188 aaKnown RBP8.88□□□□□ -0.99
SRSF6-202ENST00000483871 C2orf91Q6ZV80 131 aa8.88□□□□□ -0.99
SRSF6-202ENST00000483871 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
SRSF6-202ENST00000483871 SPANXCQ9NY87 97 aa8.88□□□□□ -0.99
SRSF6-202ENST00000483871 LOC107984156A0A0G2JMH3 177 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
SRSF6-202ENST00000483871 DDTP30046 118 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
SRSF6-202ENST00000483871 ARL17AQ8IVW1 177 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
SRSF6-202ENST00000483871 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
SRSF6-202ENST00000483871 VPREB1P12018 145 aa8.86□□□□□ -0.99
SRSF6-202ENST00000483871 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.991e-15■□□□□ 9.6
SRSF6-202ENST00000483871 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
SRSF6-202ENST00000483871 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
SRSF6-202ENST00000483871 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
SRSF6-202ENST00000483871 M0QXV9 152 aa8.85□□□□□ -0.99
SRSF6-202ENST00000483871 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
SRSF6-202ENST00000483871 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
SRSF6-202ENST00000483871 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
SRSF6-202ENST00000483871 GAGE10A6NGK3 116 aa8.83□□□□□ -1
SRSF6-202ENST00000483871 Q6ZVH6 145 aa8.83□□□□□ -1
SRSF6-202ENST00000483871 HIST1H4GQ99525 98 aa8.83□□□□□ -1
SRSF6-202ENST00000483871 HIGD1BQ9P298 99 aa8.83□□□□□ -1
SRSF6-202ENST00000483871 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
SRSF6-202ENST00000483871 NCR3O14931 201 aa8.82□□□□□ -1
SRSF6-202ENST00000483871 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
SRSF6-202ENST00000483871 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
SRSF6-202ENST00000483871 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
SRSF6-202ENST00000483871 IFITM1P13164 125 aa8.81□□□□□ -1
SRSF6-202ENST00000483871 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
SRSF6-202ENST00000483871 LINC00167Q96N53 147 aa8.81□□□□□ -1
SRSF6-202ENST00000483871 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
SRSF6-202ENST00000483871 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
SRSF6-202ENST00000483871 C7orf33Q8WU49 177 aa8.81□□□□□ -1
SRSF6-202ENST00000483871 NDUFC2O95298 119 aa8.8□□□□□ -1
SRSF6-202ENST00000483871 IGKV2-28A0A075B6P5 120 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 M0R378 163 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 IGKV2D-28P01615 120 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 UBE2BP63146 152 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
SRSF6-202ENST00000483871 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 COPS9Q8WXC6 57 aa8.78□□□□□ -1
SRSF6-202ENST00000483871 A4D1N5 150 aa8.77□□□□□ -1.01
SRSF6-202ENST00000483871 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
SRSF6-202ENST00000483871 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 CEND1Q8N111 149 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 TAL2Q16559 108 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
SRSF6-202ENST00000483871 M0R143 59 aa8.73□□□□□ -1.01
SRSF6-202ENST00000483871 FXYD2P54710 66 aa8.73□□□□□ -1.01
SRSF6-202ENST00000483871 HSD52Q0P140 79 aa8.73□□□□□ -1.01
SRSF6-202ENST00000483871 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
SRSF6-202ENST00000483871 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
SRSF6-202ENST00000483871 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
SRSF6-202ENST00000483871 HERC2O95714 4834 aa8.72□□□□□ -1.01
SRSF6-202ENST00000483871 A6NDN8 102 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 CFC1P0CG37 223 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
SRSF6-202ENST00000483871 BATFQ16520 125 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 Q5VSD8 79 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 Q8N1X5 172 aa8.71□□□□□ -1.02
SRSF6-202ENST00000483871 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
SRSF6-202ENST00000483871 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
SRSF6-202ENST00000483871 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
SRSF6-202ENST00000483871 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
SRSF6-202ENST00000483871 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
SRSF6-202ENST00000483871 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
SRSF6-202ENST00000483871 KRTAP4-5Q9BYR2 181 aa8.68□□□□□ -1.02
SRSF6-202ENST00000483871 BVES-AS1Q5T3Y7 98 aa8.67□□□□□ -1.02
SRSF6-202ENST00000483871 TRAV23DV6A0A075B6W5 121 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms