RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 S100A6P06703 90 aa9.65□□□□□ -0.86
RPP40-206ENST00000483546 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
RPP40-206ENST00000483546 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
RPP40-206ENST00000483546 LINC00158P58513 81 aa9.65□□□□□ -0.86
RPP40-206ENST00000483546 KRTDAPP60985 99 aa9.65□□□□□ -0.86
RPP40-206ENST00000483546 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
RPP40-206ENST00000483546 MRPL55Q7Z7F7 128 aaKnown RBP9.65□□□□□ -0.86
RPP40-206ENST00000483546 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
RPP40-206ENST00000483546 OXTP01178 125 aa9.64□□□□□ -0.87
RPP40-206ENST00000483546 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
RPP40-206ENST00000483546 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
RPP40-206ENST00000483546 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
RPP40-206ENST00000483546 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
RPP40-206ENST00000483546 S100A2P29034 98 aa9.63□□□□□ -0.87
RPP40-206ENST00000483546 TSPEAR-AS2P59090 65 aa9.63□□□□□ -0.87
RPP40-206ENST00000483546 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
RPP40-206ENST00000483546 NKAPP1Q8N9T2 125 aa9.63□□□□□ -0.87
RPP40-206ENST00000483546 HIST3H2BBQ8N257 126 aa9.62□□□□□ -0.87
RPP40-206ENST00000483546 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
RPP40-206ENST00000483546 SRSF9Q13242 221 aaKnown RBP eCLIP9.61□□□□□ -0.87
RPP40-206ENST00000483546 MYCBP2O75592 4640 aa9.6□□□□□ -0.87
RPP40-206ENST00000483546 VPREB1P12018 145 aa9.6□□□□□ -0.87
RPP40-206ENST00000483546 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
RPP40-206ENST00000483546 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
RPP40-206ENST00000483546 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
RPP40-206ENST00000483546 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
RPP40-206ENST00000483546 HIST1H2BLQ99880 126 aa9.59□□□□□ -0.87
RPP40-206ENST00000483546 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
RPP40-206ENST00000483546 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
RPP40-206ENST00000483546 J3QL48 77 aa9.57□□□□□ -0.88
RPP40-206ENST00000483546 REG3GQ6UW15 175 aa9.57□□□□□ -0.88
RPP40-206ENST00000483546 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
RPP40-206ENST00000483546 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
RPP40-206ENST00000483546 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
RPP40-206ENST00000483546 DIRC1Q969H9 104 aa9.55□□□□□ -0.88
RPP40-206ENST00000483546 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
RPP40-206ENST00000483546 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
RPP40-206ENST00000483546 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
RPP40-206ENST00000483546 IGLV1-50A0A075B6I6 118 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 C5orf52A6NGY3 159 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 RPL37AP8A6NKH3 93 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 M0R378 163 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 BCE1O60756 84 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 TIMM17BO60830 172 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
RPP40-206ENST00000483546 ZNF815PA8K554 130 aa9.52□□□□□ -0.89
RPP40-206ENST00000483546 ZNF861PO60384 105 aa9.51□□□□□ -0.89
RPP40-206ENST00000483546 Q8NDZ9 215 aa9.51□□□□□ -0.89
RPP40-206ENST00000483546 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
RPP40-206ENST00000483546 H0Y9J4 135 aa9.5□□□□□ -0.89
RPP40-206ENST00000483546 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
RPP40-206ENST00000483546 LINC01600Q96MT4 127 aa9.5□□□□□ -0.89
RPP40-206ENST00000483546 LRP1Q07954 4544 aaKnown RBP9.49□□□□□ -0.89
RPP40-206ENST00000483546 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 TRBV10-2A0A0K0K1G8 114 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 NDUFC2O95298 119 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 ANKRD39Q53RE8 183 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 DAND5Q8N907 189 aa9.49□□□□□ -0.89
RPP40-206ENST00000483546 HSBP1L1C9JCN9 74 aa9.48□□□□□ -0.89
RPP40-206ENST00000483546 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
RPP40-206ENST00000483546 S100A12P80511 92 aa9.47□□□□□ -0.89
RPP40-206ENST00000483546 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
RPP40-206ENST00000483546 LITAFQ99732 161 aa9.47□□□□□ -0.89
RPP40-206ENST00000483546 TMEM126AQ9H061 195 aa9.47□□□□□ -0.89
RPP40-206ENST00000483546 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
RPP40-206ENST00000483546 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 PRYO14603 147 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 NCR3O14931 201 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 UBE2AP49459 152 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 SCGB1D4Q6XE38 83 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 TTTY13Q9BZ97 58 aa9.45□□□□□ -0.9
RPP40-206ENST00000483546 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
RPP40-206ENST00000483546 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
RPP40-206ENST00000483546 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
RPP40-206ENST00000483546 SCGB1D1O95968 90 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 SOSTDC1Q6X4U4 206 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 Q6ZVH6 145 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 SPANXDQ9BXN6 97 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 KCNQ1DNQ9H478 68 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 SPANXCQ9NY87 97 aa9.43□□□□□ -0.9
RPP40-206ENST00000483546 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
RPP40-206ENST00000483546 CBY1Q9Y3M2 126 aa9.42□□□□□ -0.9
RPP40-206ENST00000483546 TRBV10-3A0A0K0K1G6 114 aa9.41□□□□□ -0.9
RPP40-206ENST00000483546 DDTP30046 118 aa9.41□□□□□ -0.9
RPP40-206ENST00000483546 PCP2Q8IVA1 136 aa9.41□□□□□ -0.9
RPP40-206ENST00000483546 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
RPP40-206ENST00000483546 IFITM1P13164 125 aa9.4□□□□□ -0.9
RPP40-206ENST00000483546 SPRR1AP35321 89 aa9.4□□□□□ -0.9
RPP40-206ENST00000483546 NPC2P61916 151 aa9.4□□□□□ -0.9
RPP40-206ENST00000483546 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
RPP40-206ENST00000483546 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
RPP40-206ENST00000483546 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
RPP40-206ENST00000483546 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
RPP40-206ENST00000483546 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
RPP40-206ENST00000483546 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms