RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 PSORS1C2Q9UIG4 136 aa5.43□□□□□ -1.54
SNX4-205ENST00000482965 C22orf24Q9Y442 160 aa5.43□□□□□ -1.54
SNX4-205ENST00000482965 MYMXA0A1B0GTQ4 84 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 HERV-K104P63124 156 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
SNX4-205ENST00000482965 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
SNX4-205ENST00000482965 A0A0U1RRA0 63 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
SNX4-205ENST00000482965 J3QQQ9 107 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 OXTP01178 125 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 C3orf79P0CE67 100 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 LGALS3P17931 250 aaKnown RBP5.41□□□□□ -1.54
SNX4-205ENST00000482965 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 KRTDAPP60985 99 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
SNX4-205ENST00000482965 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 NKAPP1Q8N9T2 125 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 TP73-AS1Q9UF72 201 aa5.41□□□□□ -1.54
SNX4-205ENST00000482965 DMBT1Q9UGM3 2413 aaPredicted RBP5.4□□□□□ -1.54
SNX4-205ENST00000482965 IGLV5-37A0A075B6J1 123 aa5.4□□□□□ -1.54
SNX4-205ENST00000482965 LINC00587B1AMM8 73 aa5.4□□□□□ -1.54
SNX4-205ENST00000482965 SMIM13P0DJ93 91 aa5.4□□□□□ -1.54
SNX4-205ENST00000482965 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.54
SNX4-205ENST00000482965 C20orf202A1L168 122 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 GAGE10A6NGK3 116 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 E9PLD3 99 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 S100A6P06703 90 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 NMUP48645 174 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
SNX4-205ENST00000482965 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
SNX4-205ENST00000482965 VPREB1P12018 145 aa5.38□□□□□ -1.55
SNX4-205ENST00000482965 S100A2P29034 98 aa5.38□□□□□ -1.55
SNX4-205ENST00000482965 SRSF9Q13242 221 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNX4-205ENST00000482965 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
SNX4-205ENST00000482965 MYCBP2O75592 4640 aa5.38□□□□□ -1.55
SNX4-205ENST00000482965 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
SNX4-205ENST00000482965 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
SNX4-205ENST00000482965 HIST3H2BBQ8N257 126 aa5.37□□□□□ -1.55
SNX4-205ENST00000482965 BOD1L2Q8IYS8 172 aa5.36□□□□□ -1.55
SNX4-205ENST00000482965 DIRC1Q969H9 104 aa5.36□□□□□ -1.55
SNX4-205ENST00000482965 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 IGKV2-28A0A075B6P5 120 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 IGKV2D-28P01615 120 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 AKR1D1P51857 326 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 DAND5Q8N907 189 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 Q8NDZ9 215 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 HIST1H2BLQ99880 126 aa5.35□□□□□ -1.55
SNX4-205ENST00000482965 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
SNX4-205ENST00000482965 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 M0R378 163 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 BCE1O60756 84 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 ATOH7Q8N100 152 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 MIEN1Q9BRT3 115 aa5.34□□□□□ -1.55
SNX4-205ENST00000482965 IGLV1-50A0A075B6I6 118 aa5.33□□□□□ -1.56
SNX4-205ENST00000482965 H0Y9J4 135 aa5.33□□□□□ -1.56
SNX4-205ENST00000482965 NCR3O14931 201 aa5.33□□□□□ -1.56
SNX4-205ENST00000482965 ZNF861PO60384 105 aa5.33□□□□□ -1.56
SNX4-205ENST00000482965 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
SNX4-205ENST00000482965 LINC01600Q96MT4 127 aa5.33□□□□□ -1.56
SNX4-205ENST00000482965 RPL28P46779 137 aaKnown RBP5.32□□□□□ -1.56
SNX4-205ENST00000482965 UBE2AP49459 152 aa5.32□□□□□ -1.56
SNX4-205ENST00000482965 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
SNX4-205ENST00000482965 LOC107984156A0A0G2JMH3 177 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 C5orf52A6NGY3 159 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 TMEM238C9JI98 176 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 TIMM17BO60830 172 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 NPC2P61916 151 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 ARL17AQ8IVW1 177 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 TMEM126AQ9H061 195 aa5.31□□□□□ -1.56
SNX4-205ENST00000482965 SCGB1D4Q6XE38 83 aa5.3□□□□□ -1.56
SNX4-205ENST00000482965 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
SNX4-205ENST00000482965 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 HSBP1L1C9JCN9 74 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 PRYO14603 147 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 NDUFC2O95298 119 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 S100A12P80511 92 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 PRLHP81277 87 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 SOSTDC1Q6X4U4 206 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 LITAFQ99732 161 aa5.29□□□□□ -1.56
SNX4-205ENST00000482965 SPANXB1Q9NS25 103 aaPredicted RBP5.29□□□□□ -1.56
SNX4-205ENST00000482965 TRBV10-3A0A0K0K1G6 114 aa5.28□□□□□ -1.56
SNX4-205ENST00000482965 SCGB1D1O95968 90 aa5.28□□□□□ -1.56
SNX4-205ENST00000482965 KRTAP13-1Q8IUC0 172 aa5.28□□□□□ -1.56
SNX4-205ENST00000482965 PCP2Q8IVA1 136 aa5.28□□□□□ -1.56
SNX4-205ENST00000482965 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
SNX4-205ENST00000482965 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
SNX4-205ENST00000482965 DDTP30046 118 aa5.27□□□□□ -1.57
SNX4-205ENST00000482965 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms