RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 NMUP48645 174 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 SEC11AP67812 179 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 PRR3P79522 188 aaKnown RBP8.01□□□□□ -1.13
COL21A1-209ENST00000482933 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
COL21A1-209ENST00000482933 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 BATFQ16520 125 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
COL21A1-209ENST00000482933 HIGD1BQ9P298 99 aa8.01□□□□□ -1.13
COL21A1-209ENST00000482933 A6NDN8 102 aa8□□□□□ -1.13
COL21A1-209ENST00000482933 VCX2Q9H322 139 aa8□□□□□ -1.13
COL21A1-209ENST00000482933 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
COL21A1-209ENST00000482933 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
COL21A1-209ENST00000482933 HSD52Q0P140 79 aa7.99□□□□□ -1.13
COL21A1-209ENST00000482933 F8WDY8 70 aa7.98□□□□□ -1.13
COL21A1-209ENST00000482933 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
COL21A1-209ENST00000482933 TAL2Q16559 108 aa7.98□□□□□ -1.13
COL21A1-209ENST00000482933 Q6ZRP5 223 aa7.98□□□□□ -1.13
COL21A1-209ENST00000482933 CST9LQ9H4G1 147 aa7.98□□□□□ -1.13
COL21A1-209ENST00000482933 IGHV3OR16-9A0A0B4J2B5 98 aa7.97□□□□□ -1.13
COL21A1-209ENST00000482933 ORAOV1Q8WV07 137 aa7.97□□□□□ -1.13
COL21A1-209ENST00000482933 FAM104AQ969W3 186 aa7.97□□□□□ -1.13
COL21A1-209ENST00000482933 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-209ENST00000482933 C11orf86A6NJI1 115 aa7.96□□□□□ -1.13
COL21A1-209ENST00000482933 E9PLD3 99 aa7.96□□□□□ -1.13
COL21A1-209ENST00000482933 HINT1P49773 126 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-209ENST00000482933 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.13
COL21A1-209ENST00000482933 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.13
COL21A1-209ENST00000482933 AMELXQ99217 191 aa7.96□□□□□ -1.13
COL21A1-209ENST00000482933 IGLV4-3A0A075B6K6 122 aa7.95□□□□□ -1.14
COL21A1-209ENST00000482933 NDUFA1O15239 70 aa7.95□□□□□ -1.14
COL21A1-209ENST00000482933 C9orf116Q5BN46 136 aaPredicted RBP7.95□□□□□ -1.14
COL21A1-209ENST00000482933 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
COL21A1-209ENST00000482933 MYMXA0A1B0GTQ4 84 aa7.94□□□□□ -1.14
COL21A1-209ENST00000482933 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
COL21A1-209ENST00000482933 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
COL21A1-209ENST00000482933 REG3GQ6UW15 175 aa7.94□□□□□ -1.14
COL21A1-209ENST00000482933 TNXBP22105 4242 aa7.94□□□□□ -1.14
COL21A1-209ENST00000482933 A0A087WZ39 114 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 A0A1B0GV90 55 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 H3BRM9 83 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
COL21A1-209ENST00000482933 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
COL21A1-209ENST00000482933 LGALS3P17931 250 aaKnown RBP7.92□□□□□ -1.14
COL21A1-209ENST00000482933 SRSF9Q13242 221 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL21A1-209ENST00000482933 LINC00242Q5T6M2 205 aa7.92□□□□□ -1.14
COL21A1-209ENST00000482933 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
COL21A1-209ENST00000482933 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
COL21A1-209ENST00000482933 PCP2Q8IVA1 136 aa7.91□□□□□ -1.14
COL21A1-209ENST00000482933 TINCRA0A1B0GVN0 87 aa7.9□□□□□ -1.14
COL21A1-209ENST00000482933 UBE2D1P51668 147 aa7.9□□□□□ -1.14
COL21A1-209ENST00000482933 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
COL21A1-209ENST00000482933 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
COL21A1-209ENST00000482933 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
COL21A1-209ENST00000482933 GEMIN7Q9H840 131 aaKnown RBP7.9□□□□□ -1.14
COL21A1-209ENST00000482933 TRBV30A0A0K0K1B3 111 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
COL21A1-209ENST00000482933 IGKV2D-26A0A0A0MRZ7 120 aa7.88□□□□□ -1.15
COL21A1-209ENST00000482933 LEPROTO15243 131 aa7.88□□□□□ -1.15
COL21A1-209ENST00000482933 HERVK_113P63121 156 aa7.88□□□□□ -1.15
COL21A1-209ENST00000482933 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
COL21A1-209ENST00000482933 PSORS1C2Q9UIG4 136 aa7.88□□□□□ -1.15
COL21A1-209ENST00000482933 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 C1orf137Q5JT78 98 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 CEND1Q8N111 149 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
COL21A1-209ENST00000482933 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 J3QQQ9 107 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 PRSS2P07478 247 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
COL21A1-209ENST00000482933 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 VAMP3Q15836 100 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 Q6ZVH6 145 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 GTF2H5Q6ZYL4 71 aa7.86□□□□□ -1.15
COL21A1-209ENST00000482933 IGLV5-45A0A087WSX0 123 aa7.85□□□□□ -1.15
COL21A1-209ENST00000482933 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
COL21A1-209ENST00000482933 NDUFC2-KCTD14E9PQ53 114 aa7.85□□□□□ -1.15
COL21A1-209ENST00000482933 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
COL21A1-209ENST00000482933 SPANXB1Q9NS25 103 aaPredicted RBP7.85□□□□□ -1.15
COL21A1-209ENST00000482933 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 FAM168BA1KXE4 195 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 CKS1BP61024 79 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.15
COL21A1-209ENST00000482933 Q8IZM0 81 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 TOMM7Q9P0U1 55 aa7.84□□□□□ -1.15
COL21A1-209ENST00000482933 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
COL21A1-209ENST00000482933 LINC00469Q8N7U9 141 aa7.83□□□□□ -1.16
COL21A1-209ENST00000482933 TP73-AS1Q9UF72 201 aa7.83□□□□□ -1.16
COL21A1-209ENST00000482933 TAX1BP3O14907 124 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms