RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 HIST1H2BJP06899 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 IGLC3P0DOY3 106 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BOP23527 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BBP33778 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BDP58876 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BCP62807 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST2H2BEQ16778 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BHQ93079 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BNQ99877 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 HIST1H2BMQ99879 126 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
TMEM54-206ENST00000482771 NKAPP1Q8N9T2 125 aa7.35□□□□□ -1.23
TMEM54-206ENST00000482771 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
TMEM54-206ENST00000482771 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
TMEM54-206ENST00000482771 CXCL5P42830 114 aa7.34□□□□□ -1.23
TMEM54-206ENST00000482771 CTAG1AP78358 180 aa7.34□□□□□ -1.23
TMEM54-206ENST00000482771 FAM19A2Q8N3H0 131 aa7.34□□□□□ -1.23
TMEM54-206ENST00000482771 IGLV5-37A0A075B6J1 123 aa7.33□□□□□ -1.24
TMEM54-206ENST00000482771 IGKV2-28A0A075B6P5 120 aa7.33□□□□□ -1.24
TMEM54-206ENST00000482771 IGKV2D-28P01615 120 aa7.33□□□□□ -1.24
TMEM54-206ENST00000482771 LINC01547P58512 204 aaPredicted RBP7.33□□□□□ -1.24
TMEM54-206ENST00000482771 LINC00337Q8N6G1 96 aa7.33□□□□□ -1.24
TMEM54-206ENST00000482771 SMIM1B2RUZ4 78 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 H3BRM9 83 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 LEPROTL1O95214 131 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 NDUFA6P56556 154 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 PRLHP81277 87 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
TMEM54-206ENST00000482771 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
TMEM54-206ENST00000482771 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
TMEM54-206ENST00000482771 ZNF22P17026 224 aaPredicted RBP7.31□□□□□ -1.24
TMEM54-206ENST00000482771 FAM19A1Q7Z5A9 133 aa7.31□□□□□ -1.24
TMEM54-206ENST00000482771 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
TMEM54-206ENST00000482771 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
TMEM54-206ENST00000482771 HSPB8Q9UJY1 196 aa7.31□□□□□ -1.24
TMEM54-206ENST00000482771 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
TMEM54-206ENST00000482771 CHTOPQ9Y3Y2 248 aaKnown RBP7.3□□□□□ -1.24
TMEM54-206ENST00000482771 IGLV5-39A0A0G2JS06 123 aa7.29□□□□□ -1.24
TMEM54-206ENST00000482771 C11orf86A6NJI1 115 aa7.29□□□□□ -1.24
TMEM54-206ENST00000482771 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
TMEM54-206ENST00000482771 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
TMEM54-206ENST00000482771 SPINK8P0C7L1 97 aa7.28□□□□□ -1.24
TMEM54-206ENST00000482771 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
TMEM54-206ENST00000482771 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
TMEM54-206ENST00000482771 TMEM126AQ9H061 195 aa7.28□□□□□ -1.24
TMEM54-206ENST00000482771 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
TMEM54-206ENST00000482771 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
TMEM54-206ENST00000482771 FABP4P15090 132 aa7.26□□□□□ -1.25
TMEM54-206ENST00000482771 PFN2P35080 140 aa7.26□□□□□ -1.25
TMEM54-206ENST00000482771 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
TMEM54-206ENST00000482771 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
TMEM54-206ENST00000482771 M0R378 163 aa7.25□□□□□ -1.25
TMEM54-206ENST00000482771 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
TMEM54-206ENST00000482771 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
TMEM54-206ENST00000482771 VPREB1P12018 145 aa7.24□□□□□ -1.25
TMEM54-206ENST00000482771 PLNP26678 52 aa7.24□□□□□ -1.25
TMEM54-206ENST00000482771 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
TMEM54-206ENST00000482771 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
TMEM54-206ENST00000482771 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
TMEM54-206ENST00000482771 RPL24P83731 157 aaKnown RBP7.23□□□□□ -1.25
TMEM54-206ENST00000482771 DAND5Q8N907 189 aa7.23□□□□□ -1.25
TMEM54-206ENST00000482771 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
TMEM54-206ENST00000482771 H0Y8G0 127 aa7.22□□□□□ -1.25
TMEM54-206ENST00000482771 SYS1-DBNDD2H3BUS1 97 aa7.22□□□□□ -1.25
TMEM54-206ENST00000482771 DPM2O94777 84 aa7.22□□□□□ -1.25
TMEM54-206ENST00000482771 SPRR4Q96PI1 79 aa7.22□□□□□ -1.25
TMEM54-206ENST00000482771 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
TMEM54-206ENST00000482771 Q8NBF4 154 aa7.21□□□□□ -1.26
TMEM54-206ENST00000482771 IGKCP01834 107 aa7.2□□□□□ -1.26
TMEM54-206ENST00000482771 LINC01545Q5VT33 79 aa7.2□□□□□ -1.26
TMEM54-206ENST00000482771 Q8NDZ9 215 aa7.2□□□□□ -1.26
TMEM54-206ENST00000482771 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
TMEM54-206ENST00000482771 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
TMEM54-206ENST00000482771 C3orf79P0CE67 100 aa7.18□□□□□ -1.26
TMEM54-206ENST00000482771 HERVK_113P61574 105 aa7.18□□□□□ -1.26
TMEM54-206ENST00000482771 COX17Q14061 63 aa7.18□□□□□ -1.26
TMEM54-206ENST00000482771 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
TMEM54-206ENST00000482771 SPINK1P00995 79 aa7.17□□□□□ -1.26
TMEM54-206ENST00000482771 HIST3H2BBQ8N257 126 aa7.17□□□□□ -1.26
TMEM54-206ENST00000482771 ZNF706Q9Y5V0 76 aaPredicted RBP7.17□□□□□ -1.26
TMEM54-206ENST00000482771 LEPROTO15243 131 aa7.16□□□□□ -1.26
TMEM54-206ENST00000482771 HERV-K104P63124 156 aa7.16□□□□□ -1.26
TMEM54-206ENST00000482771 S100A6P06703 90 aa7.15□□□□□ -1.26
TMEM54-206ENST00000482771 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
TMEM54-206ENST00000482771 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
TMEM54-206ENST00000482771 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.26
TMEM54-206ENST00000482771 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 C20orf202A1L168 122 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 E9PLD3 99 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 J3QQQ9 107 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 NMUP48645 174 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 AKR1D1P51857 326 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 TSPEAR-AS2P59090 65 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 KRTDAPP60985 99 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 HIST1H2BLQ99880 126 aa7.14□□□□□ -1.27
TMEM54-206ENST00000482771 LINC00587B1AMM8 73 aa7.13□□□□□ -1.27
TMEM54-206ENST00000482771 S100A2P29034 98 aa7.13□□□□□ -1.27
TMEM54-206ENST00000482771 C5orf52A6NGY3 159 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms